Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Trbv3A0A0A6YYE2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv3A0A0A6YYE2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv3A0A0A6YYE2 Haglr-201ENSMUST00000100000 2085 ntBASIC13.95□□□□□ -0.18
Trbv3A0A0A6YYE2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trbv3A0A0A6YYE2 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv3A0A0A6YYE2 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv3A0A0A6YYE2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv3A0A0A6YYE2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv3A0A0A6YYE2 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC13.95□□□□□ -0.18
Trbv3A0A0A6YYE2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv3A0A0A6YYE2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv3A0A0A6YYE2 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trbv3A0A0A6YYE2 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv3A0A0A6YYE2 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv3A0A0A6YYE2 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv3A0A0A6YYE2 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv3A0A0A6YYE2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv3A0A0A6YYE2 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trbv3A0A0A6YYE2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.94□□□□□ -0.18
Trbv3A0A0A6YYE2 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv3A0A0A6YYE2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trbv3A0A0A6YYE2 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv3A0A0A6YYE2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trbv3A0A0A6YYE2 Cap2-205ENSMUST00000225824 1634 ntBASIC13.94□□□□□ -0.18
Trbv3A0A0A6YYE2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trbv3A0A0A6YYE2 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv3A0A0A6YYE2 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trbv3A0A0A6YYE2 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv3A0A0A6YYE2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC13.94□□□□□ -0.18
Trbv3A0A0A6YYE2 Gm27032-201ENSMUST00000183124 1116 ntBASIC13.94□□□□□ -0.18
Trbv3A0A0A6YYE2 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv3A0A0A6YYE2 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv3A0A0A6YYE2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv3A0A0A6YYE2 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trbv3A0A0A6YYE2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv3A0A0A6YYE2 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trbv3A0A0A6YYE2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Trbv3A0A0A6YYE2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv3A0A0A6YYE2 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv3A0A0A6YYE2 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv3A0A0A6YYE2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv3A0A0A6YYE2 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv3A0A0A6YYE2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv3A0A0A6YYE2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv3A0A0A6YYE2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv3A0A0A6YYE2 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv3A0A0A6YYE2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC13.93□□□□□ -0.18
Trbv3A0A0A6YYE2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC13.93□□□□□ -0.18
Trbv3A0A0A6YYE2 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trbv3A0A0A6YYE2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv3A0A0A6YYE2 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv3A0A0A6YYE2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv3A0A0A6YYE2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv3A0A0A6YYE2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv3A0A0A6YYE2 Shroom3-211ENSMUST00000225438 5742 ntBASIC13.93□□□□□ -0.18
Trbv3A0A0A6YYE2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv3A0A0A6YYE2 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv3A0A0A6YYE2 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv3A0A0A6YYE2 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv3A0A0A6YYE2 Gm37374-201ENSMUST00000194954 1829 ntBASIC13.92□□□□□ -0.18
Trbv3A0A0A6YYE2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv3A0A0A6YYE2 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trbv3A0A0A6YYE2 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv3A0A0A6YYE2 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC13.92□□□□□ -0.18
Trbv3A0A0A6YYE2 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC13.92□□□□□ -0.18
Trbv3A0A0A6YYE2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.92□□□□□ -0.18
Trbv3A0A0A6YYE2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Trbv3A0A0A6YYE2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv3A0A0A6YYE2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv3A0A0A6YYE2 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv3A0A0A6YYE2 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv3A0A0A6YYE2 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC13.92□□□□□ -0.18
Trbv3A0A0A6YYE2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC13.91□□□□□ -0.18
Trbv3A0A0A6YYE2 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC13.91□□□□□ -0.18
Trbv3A0A0A6YYE2 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv3A0A0A6YYE2 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv3A0A0A6YYE2 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv3A0A0A6YYE2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv3A0A0A6YYE2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv3A0A0A6YYE2 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trbv3A0A0A6YYE2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv3A0A0A6YYE2 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.91□□□□□ -0.18
Trbv3A0A0A6YYE2 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv3A0A0A6YYE2 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv3A0A0A6YYE2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv3A0A0A6YYE2 Gm8309-201ENSMUST00000206627 1448 ntBASIC13.9□□□□□ -0.18
Trbv3A0A0A6YYE2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv3A0A0A6YYE2 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv3A0A0A6YYE2 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC13.9□□□□□ -0.18
Trbv3A0A0A6YYE2 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trbv3A0A0A6YYE2 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv3A0A0A6YYE2 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.9□□□□□ -0.18
Trbv3A0A0A6YYE2 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv3A0A0A6YYE2 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv3A0A0A6YYE2 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Trbv3A0A0A6YYE2 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC13.9□□□□□ -0.18
Trbv3A0A0A6YYE2 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC13.9□□□□□ -0.18
Trbv3A0A0A6YYE2 Gm19094-201ENSMUST00000209791 1246 ntBASIC13.9□□□□□ -0.18
Trbv3A0A0A6YYE2 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms