Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC13.75□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC13.75□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.75□□□□□ -0.21
Ighv1-52A0A0A6YXC3 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ighv1-52A0A0A6YXC3 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.75□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC13.75□□□□□ -0.21
Ighv1-52A0A0A6YXC3 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Ighv1-52A0A0A6YXC3 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.74□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Wnt10b-205ENSMUST00000226846 1204 ntBASIC13.74□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Gm15847-201ENSMUST00000121417 1065 ntBASIC13.73□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC13.73□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC13.73□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC13.73□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Ighv1-52A0A0A6YXC3 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Gm38345-201ENSMUST00000192635 1748 ntBASIC13.73□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ighv1-52A0A0A6YXC3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC13.72□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC13.72□□□□□ -0.21
Ighv1-52A0A0A6YXC3 CT025689.6-201ENSMUST00000224991 1104 ntBASIC13.72□□□□□ -0.21
Ighv1-52A0A0A6YXC3 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC13.71□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC13.71□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Zfp783-201ENSMUST00000095946 670 ntBASIC13.71□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
Ighv1-52A0A0A6YXC3 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Ighv1-52A0A0A6YXC3 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ighv1-52A0A0A6YXC3 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms