Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbc1A0A0A6YWV4 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbc1A0A0A6YWV4 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbc1A0A0A6YWV4 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trbc1A0A0A6YWV4 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbc1A0A0A6YWV4 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbc1A0A0A6YWV4 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbc1A0A0A6YWV4 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.59■□□□□ 0.25
Trbc1A0A0A6YWV4 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbc1A0A0A6YWV4 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbc1A0A0A6YWV4 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trbc1A0A0A6YWV4 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbc1A0A0A6YWV4 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trbc1A0A0A6YWV4 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trbc1A0A0A6YWV4 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trbc1A0A0A6YWV4 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trbc1A0A0A6YWV4 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbc1A0A0A6YWV4 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.58■□□□□ 0.24
Trbc1A0A0A6YWV4 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.58■□□□□ 0.24
Trbc1A0A0A6YWV4 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.58■□□□□ 0.24
Trbc1A0A0A6YWV4 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.58■□□□□ 0.24
Trbc1A0A0A6YWV4 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.58■□□□□ 0.24
Trbc1A0A0A6YWV4 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbc1A0A0A6YWV4 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbc1A0A0A6YWV4 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Trbc1A0A0A6YWV4 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Trbc1A0A0A6YWV4 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trbc1A0A0A6YWV4 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.58■□□□□ 0.24
Trbc1A0A0A6YWV4 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.58■□□□□ 0.24
Trbc1A0A0A6YWV4 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.58■□□□□ 0.24
Trbc1A0A0A6YWV4 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbc1A0A0A6YWV4 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbc1A0A0A6YWV4 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trbc1A0A0A6YWV4 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbc1A0A0A6YWV4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbc1A0A0A6YWV4 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Trbc1A0A0A6YWV4 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbc1A0A0A6YWV4 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trbc1A0A0A6YWV4 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbc1A0A0A6YWV4 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trbc1A0A0A6YWV4 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.57■□□□□ 0.24
Trbc1A0A0A6YWV4 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbc1A0A0A6YWV4 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.57■□□□□ 0.24
Trbc1A0A0A6YWV4 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.57■□□□□ 0.24
Trbc1A0A0A6YWV4 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbc1A0A0A6YWV4 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbc1A0A0A6YWV4 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbc1A0A0A6YWV4 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbc1A0A0A6YWV4 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trbc1A0A0A6YWV4 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbc1A0A0A6YWV4 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbc1A0A0A6YWV4 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbc1A0A0A6YWV4 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbc1A0A0A6YWV4 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.56■□□□□ 0.24
Trbc1A0A0A6YWV4 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbc1A0A0A6YWV4 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trbc1A0A0A6YWV4 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbc1A0A0A6YWV4 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.56■□□□□ 0.24
Trbc1A0A0A6YWV4 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbc1A0A0A6YWV4 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trbc1A0A0A6YWV4 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbc1A0A0A6YWV4 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbc1A0A0A6YWV4 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbc1A0A0A6YWV4 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbc1A0A0A6YWV4 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trbc1A0A0A6YWV4 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.55■□□□□ 0.24
Trbc1A0A0A6YWV4 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.55■□□□□ 0.24
Trbc1A0A0A6YWV4 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.55■□□□□ 0.24
Trbc1A0A0A6YWV4 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.55■□□□□ 0.24
Trbc1A0A0A6YWV4 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.55■□□□□ 0.24
Trbc1A0A0A6YWV4 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trbc1A0A0A6YWV4 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trbc1A0A0A6YWV4 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbc1A0A0A6YWV4 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.55■□□□□ 0.24
Trbc1A0A0A6YWV4 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.55■□□□□ 0.24
Trbc1A0A0A6YWV4 Gm44549-201ENSMUST00000208351 577 ntBASIC16.55■□□□□ 0.24
Trbc1A0A0A6YWV4 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trbc1A0A0A6YWV4 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trbc1A0A0A6YWV4 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trbc1A0A0A6YWV4 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trbc1A0A0A6YWV4 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbc1A0A0A6YWV4 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trbc1A0A0A6YWV4 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.55■□□□□ 0.24
Trbc1A0A0A6YWV4 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.55■□□□□ 0.24
Trbc1A0A0A6YWV4 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbc1A0A0A6YWV4 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbc1A0A0A6YWV4 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbc1A0A0A6YWV4 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trbc1A0A0A6YWV4 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbc1A0A0A6YWV4 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbc1A0A0A6YWV4 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbc1A0A0A6YWV4 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trbc1A0A0A6YWV4 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbc1A0A0A6YWV4 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trbc1A0A0A6YWV4 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trbc1A0A0A6YWV4 Gm22325-201ENSMUST00000158904 308 ntBASIC16.54■□□□□ 0.24
Trbc1A0A0A6YWV4 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbc1A0A0A6YWV4 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trbc1A0A0A6YWV4 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbc1A0A0A6YWV4 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms