Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.11■□□□□ 0.01
Trav5-4A0A075B652 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5-4A0A075B652 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5-4A0A075B652 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5-4A0A075B652 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5-4A0A075B652 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5-4A0A075B652 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5-4A0A075B652 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5-4A0A075B652 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav5-4A0A075B652 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5-4A0A075B652 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-4A0A075B652 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-4A0A075B652 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-4A0A075B652 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-4A0A075B652 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-4A0A075B652 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-4A0A075B652 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-4A0A075B652 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-4A0A075B652 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-4A0A075B652 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav5-4A0A075B652 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-4A0A075B652 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC15.1■□□□□ 0.01
Trav5-4A0A075B652 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-4A0A075B652 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-4A0A075B652 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-4A0A075B652 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.1■□□□□ 0.01
Trav5-4A0A075B652 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-4A0A075B652 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-4A0A075B652 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-4A0A075B652 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-4A0A075B652 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav5-4A0A075B652 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-4A0A075B652 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-4A0A075B652 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-4A0A075B652 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-4A0A075B652 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav5-4A0A075B652 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav5-4A0A075B652 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav5-4A0A075B652 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav5-4A0A075B652 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav5-4A0A075B652 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav5-4A0A075B652 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav5-4A0A075B652 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav5-4A0A075B652 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.09■□□□□ 0.01
Trav5-4A0A075B652 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav5-4A0A075B652 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav5-4A0A075B652 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav5-4A0A075B652 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav5-4A0A075B652 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav5-4A0A075B652 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trav5-4A0A075B652 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav5-4A0A075B652 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav5-4A0A075B652 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Trav5-4A0A075B652 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav5-4A0A075B652 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav5-4A0A075B652 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav5-4A0A075B652 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trav5-4A0A075B652 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav5-4A0A075B652 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav5-4A0A075B652 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.08■□□□□ 0
Trav5-4A0A075B652 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav5-4A0A075B652 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav5-4A0A075B652 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav5-4A0A075B652 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav5-4A0A075B652 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trav5-4A0A075B652 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav5-4A0A075B652 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav5-4A0A075B652 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trav5-4A0A075B652 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.07■□□□□ 0
Trav5-4A0A075B652 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav5-4A0A075B652 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav5-4A0A075B652 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Trav5-4A0A075B652 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav5-4A0A075B652 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav5-4A0A075B652 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav5-4A0A075B652 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav5-4A0A075B652 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav5-4A0A075B652 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC15.07■□□□□ 0
Trav5-4A0A075B652 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Trav5-4A0A075B652 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav5-4A0A075B652 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav5-4A0A075B652 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trav5-4A0A075B652 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav5-4A0A075B652 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav5-4A0A075B652 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trav5-4A0A075B652 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav5-4A0A075B652 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav5-4A0A075B652 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav5-4A0A075B652 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav5-4A0A075B652 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
Trav5-4A0A075B652 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC15.06■□□□□ 0
Trav5-4A0A075B652 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC15.06■□□□□ 0
Trav5-4A0A075B652 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC15.06■□□□□ 0
Trav5-4A0A075B652 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav5-4A0A075B652 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav5-4A0A075B652 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav5-4A0A075B652 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav5-4A0A075B652 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav5-4A0A075B652 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav5-4A0A075B652 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.05■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms