Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC14.8□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.79□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.79□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.78□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.78□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC14.78□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.78□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC14.77□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Gm21956-201ENSMUST00000179946 522 ntBASIC14.77□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Gm40848-201ENSMUST00000221998 324 ntBASIC14.77□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms