Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav14n-3A0A075B645 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav14n-3A0A075B645 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav14n-3A0A075B645 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav14n-3A0A075B645 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav14n-3A0A075B645 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav14n-3A0A075B645 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav14n-3A0A075B645 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trav14n-3A0A075B645 Gm43808-201ENSMUST00000202534 2065 ntBASIC13.67□□□□□ -0.22
Trav14n-3A0A075B645 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav14n-3A0A075B645 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav14n-3A0A075B645 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav14n-3A0A075B645 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav14n-3A0A075B645 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav14n-3A0A075B645 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav14n-3A0A075B645 Gm7417-201ENSMUST00000192950 473 ntBASIC13.67□□□□□ -0.22
Trav14n-3A0A075B645 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav14n-3A0A075B645 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav14n-3A0A075B645 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav14n-3A0A075B645 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav14n-3A0A075B645 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Trav14n-3A0A075B645 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav14n-3A0A075B645 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav14n-3A0A075B645 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav14n-3A0A075B645 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav14n-3A0A075B645 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav14n-3A0A075B645 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav14n-3A0A075B645 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav14n-3A0A075B645 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav14n-3A0A075B645 AC121961.1-201ENSMUST00000218594 1779 ntBASIC13.66□□□□□ -0.22
Trav14n-3A0A075B645 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav14n-3A0A075B645 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav14n-3A0A075B645 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav14n-3A0A075B645 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav14n-3A0A075B645 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav14n-3A0A075B645 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav14n-3A0A075B645 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav14n-3A0A075B645 Gm7860-201ENSMUST00000121190 879 ntBASIC13.66□□□□□ -0.22
Trav14n-3A0A075B645 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav14n-3A0A075B645 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav14n-3A0A075B645 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav14n-3A0A075B645 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav14n-3A0A075B645 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav14n-3A0A075B645 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav14n-3A0A075B645 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav14n-3A0A075B645 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav14n-3A0A075B645 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC13.66□□□□□ -0.22
Trav14n-3A0A075B645 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav14n-3A0A075B645 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav14n-3A0A075B645 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav14n-3A0A075B645 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav14n-3A0A075B645 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav14n-3A0A075B645 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav14n-3A0A075B645 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav14n-3A0A075B645 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav14n-3A0A075B645 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav14n-3A0A075B645 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav14n-3A0A075B645 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav14n-3A0A075B645 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC13.65□□□□□ -0.22
Trav14n-3A0A075B645 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav14n-3A0A075B645 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav14n-3A0A075B645 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav14n-3A0A075B645 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav14n-3A0A075B645 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav14n-3A0A075B645 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav14n-3A0A075B645 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav14n-3A0A075B645 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav14n-3A0A075B645 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav14n-3A0A075B645 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav14n-3A0A075B645 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav14n-3A0A075B645 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav14n-3A0A075B645 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav14n-3A0A075B645 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav14n-3A0A075B645 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC13.64□□□□□ -0.23
Trav14n-3A0A075B645 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC13.64□□□□□ -0.23
Trav14n-3A0A075B645 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav14n-3A0A075B645 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trav14n-3A0A075B645 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav14n-3A0A075B645 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Trav14n-3A0A075B645 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Trav14n-3A0A075B645 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav14n-3A0A075B645 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav14n-3A0A075B645 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav14n-3A0A075B645 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav14n-3A0A075B645 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav14n-3A0A075B645 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav14n-3A0A075B645 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav14n-3A0A075B645 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav14n-3A0A075B645 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav14n-3A0A075B645 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav14n-3A0A075B645 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav14n-3A0A075B645 Tgds-204ENSMUST00000228543 1594 ntBASIC13.63□□□□□ -0.23
Trav14n-3A0A075B645 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav14n-3A0A075B645 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav14n-3A0A075B645 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav14n-3A0A075B645 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav14n-3A0A075B645 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav14n-3A0A075B645 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav14n-3A0A075B645 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav14n-3A0A075B645 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms