Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trav13-1A0A075B644 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13-1A0A075B644 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13-1A0A075B644 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13-1A0A075B644 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13-1A0A075B644 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13-1A0A075B644 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13-1A0A075B644 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13-1A0A075B644 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav13-1A0A075B644 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13-1A0A075B644 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Trav13-1A0A075B644 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13-1A0A075B644 Gm43231-201ENSMUST00000202960 2258 ntBASIC12.85□□□□□ -0.35
Trav13-1A0A075B644 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13-1A0A075B644 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13-1A0A075B644 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13-1A0A075B644 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Trav13-1A0A075B644 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13-1A0A075B644 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13-1A0A075B644 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13-1A0A075B644 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13-1A0A075B644 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav13-1A0A075B644 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13-1A0A075B644 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Trav13-1A0A075B644 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13-1A0A075B644 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav13-1A0A075B644 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13-1A0A075B644 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav13-1A0A075B644 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav13-1A0A075B644 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav13-1A0A075B644 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Trav13-1A0A075B644 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav13-1A0A075B644 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13-1A0A075B644 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13-1A0A075B644 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13-1A0A075B644 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13-1A0A075B644 Gm8520-201ENSMUST00000186517 868 ntBASIC12.83□□□□□ -0.36
Trav13-1A0A075B644 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC12.83□□□□□ -0.36
Trav13-1A0A075B644 Gm2559-201ENSMUST00000201323 363 ntBASIC12.83□□□□□ -0.36
Trav13-1A0A075B644 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC12.83□□□□□ -0.36
Trav13-1A0A075B644 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13-1A0A075B644 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trav13-1A0A075B644 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13-1A0A075B644 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13-1A0A075B644 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13-1A0A075B644 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC12.83□□□□□ -0.36
Trav13-1A0A075B644 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13-1A0A075B644 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13-1A0A075B644 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13-1A0A075B644 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13-1A0A075B644 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13-1A0A075B644 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav13-1A0A075B644 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13-1A0A075B644 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav13-1A0A075B644 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav13-1A0A075B644 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13-1A0A075B644 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav13-1A0A075B644 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Trav13-1A0A075B644 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav13-1A0A075B644 Gm12896-201ENSMUST00000118430 226 ntBASIC12.82□□□□□ -0.36
Trav13-1A0A075B644 Gm13168-201ENSMUST00000121771 632 ntBASIC12.82□□□□□ -0.36
Trav13-1A0A075B644 Gm22240-201ENSMUST00000175225 82 ntBASIC12.82□□□□□ -0.36
Trav13-1A0A075B644 Gm37856-201ENSMUST00000191634 999 ntBASIC12.82□□□□□ -0.36
Trav13-1A0A075B644 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.82□□□□□ -0.36
Trav13-1A0A075B644 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13-1A0A075B644 AC126028.2-201ENSMUST00000228100 1833 ntBASIC12.82□□□□□ -0.36
Trav13-1A0A075B644 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13-1A0A075B644 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13-1A0A075B644 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13-1A0A075B644 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Trav13-1A0A075B644 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13-1A0A075B644 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Trav13-1A0A075B644 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
Trav13-1A0A075B644 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13-1A0A075B644 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13-1A0A075B644 Gm43672-201ENSMUST00000199072 1731 ntBASIC12.82□□□□□ -0.36
Trav13-1A0A075B644 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13-1A0A075B644 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav13-1A0A075B644 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13-1A0A075B644 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13-1A0A075B644 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-1A0A075B644 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-1A0A075B644 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-1A0A075B644 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-1A0A075B644 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav13-1A0A075B644 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-1A0A075B644 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav13-1A0A075B644 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-1A0A075B644 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav13-1A0A075B644 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-1A0A075B644 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-1A0A075B644 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-1A0A075B644 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-1A0A075B644 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-1A0A075B644 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC12.81□□□□□ -0.36
Trav13-1A0A075B644 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-1A0A075B644 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-1A0A075B644 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav13-1A0A075B644 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-1A0A075B644 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms