Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-7-dv9A0A075B639 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-7-dv9A0A075B639 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-7-dv9A0A075B639 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-7-dv9A0A075B639 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-7-dv9A0A075B639 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trav6-7-dv9A0A075B639 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.03■□□□□ 0.16
Trav6-7-dv9A0A075B639 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-7-dv9A0A075B639 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Trav6-7-dv9A0A075B639 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-7-dv9A0A075B639 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.03■□□□□ 0.16
Trav6-7-dv9A0A075B639 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-7-dv9A0A075B639 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.03■□□□□ 0.16
Trav6-7-dv9A0A075B639 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-7-dv9A0A075B639 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-7-dv9A0A075B639 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-7-dv9A0A075B639 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.02■□□□□ 0.16
Trav6-7-dv9A0A075B639 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6-7-dv9A0A075B639 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6-7-dv9A0A075B639 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6-7-dv9A0A075B639 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6-7-dv9A0A075B639 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6-7-dv9A0A075B639 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6-7-dv9A0A075B639 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6-7-dv9A0A075B639 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6-7-dv9A0A075B639 Gm10849-201ENSMUST00000100397 618 ntBASIC16.02■□□□□ 0.16
Trav6-7-dv9A0A075B639 Gm7290-201ENSMUST00000104990 617 ntBASIC16.02■□□□□ 0.16
Trav6-7-dv9A0A075B639 Gm12918-201ENSMUST00000120234 636 ntBASIC16.02■□□□□ 0.16
Trav6-7-dv9A0A075B639 Gm15710-201ENSMUST00000121821 636 ntBASIC16.02■□□□□ 0.16
Trav6-7-dv9A0A075B639 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6-7-dv9A0A075B639 Gm5075-201ENSMUST00000196916 622 ntBASIC16.02■□□□□ 0.16
Trav6-7-dv9A0A075B639 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.02■□□□□ 0.16
Trav6-7-dv9A0A075B639 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.02■□□□□ 0.16
Trav6-7-dv9A0A075B639 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Trav6-7-dv9A0A075B639 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav6-7-dv9A0A075B639 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav6-7-dv9A0A075B639 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav6-7-dv9A0A075B639 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav6-7-dv9A0A075B639 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav6-7-dv9A0A075B639 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trav6-7-dv9A0A075B639 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.02■□□□□ 0.15
Trav6-7-dv9A0A075B639 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.02■□□□□ 0.15
Trav6-7-dv9A0A075B639 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trav6-7-dv9A0A075B639 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6-7-dv9A0A075B639 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trav6-7-dv9A0A075B639 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.01■□□□□ 0.15
Trav6-7-dv9A0A075B639 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6-7-dv9A0A075B639 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.01■□□□□ 0.15
Trav6-7-dv9A0A075B639 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.01■□□□□ 0.15
Trav6-7-dv9A0A075B639 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.01■□□□□ 0.15
Trav6-7-dv9A0A075B639 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6-7-dv9A0A075B639 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6-7-dv9A0A075B639 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6-7-dv9A0A075B639 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6-7-dv9A0A075B639 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav6-7-dv9A0A075B639 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6-7-dv9A0A075B639 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6-7-dv9A0A075B639 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6-7-dv9A0A075B639 Gm5828-201ENSMUST00000071842 1860 ntBASIC16■□□□□ 0.15
Trav6-7-dv9A0A075B639 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav6-7-dv9A0A075B639 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16■□□□□ 0.15
Trav6-7-dv9A0A075B639 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6-7-dv9A0A075B639 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16■□□□□ 0.15
Trav6-7-dv9A0A075B639 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trav6-7-dv9A0A075B639 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16■□□□□ 0.15
Trav6-7-dv9A0A075B639 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav6-7-dv9A0A075B639 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav6-7-dv9A0A075B639 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6-7-dv9A0A075B639 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6-7-dv9A0A075B639 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6-7-dv9A0A075B639 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav6-7-dv9A0A075B639 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6-7-dv9A0A075B639 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6-7-dv9A0A075B639 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trav6-7-dv9A0A075B639 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav6-7-dv9A0A075B639 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16■□□□□ 0.15
Trav6-7-dv9A0A075B639 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.99■□□□□ 0.15
Trav6-7-dv9A0A075B639 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.99■□□□□ 0.15
Trav6-7-dv9A0A075B639 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Trav6-7-dv9A0A075B639 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6-7-dv9A0A075B639 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6-7-dv9A0A075B639 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6-7-dv9A0A075B639 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6-7-dv9A0A075B639 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.99■□□□□ 0.15
Trav6-7-dv9A0A075B639 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Trav6-7-dv9A0A075B639 Gm8495-201ENSMUST00000188740 694 ntBASIC15.99■□□□□ 0.15
Trav6-7-dv9A0A075B639 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6-7-dv9A0A075B639 Gm6365-201ENSMUST00000054711 744 ntBASIC15.99■□□□□ 0.15
Trav6-7-dv9A0A075B639 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6-7-dv9A0A075B639 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6-7-dv9A0A075B639 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6-7-dv9A0A075B639 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6-7-dv9A0A075B639 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6-7-dv9A0A075B639 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC15.99■□□□□ 0.15
Trav6-7-dv9A0A075B639 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6-7-dv9A0A075B639 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6-7-dv9A0A075B639 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trav6-7-dv9A0A075B639 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6-7-dv9A0A075B639 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6-7-dv9A0A075B639 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms