Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.58■□□□□ 0.24
Trav8n-2A0A075B633 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav8n-2A0A075B633 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav8n-2A0A075B633 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav8n-2A0A075B633 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav8n-2A0A075B633 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav8n-2A0A075B633 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav8n-2A0A075B633 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav8n-2A0A075B633 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav8n-2A0A075B633 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav8n-2A0A075B633 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav8n-2A0A075B633 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav8n-2A0A075B633 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav8n-2A0A075B633 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Trav8n-2A0A075B633 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav8n-2A0A075B633 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trav8n-2A0A075B633 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.57■□□□□ 0.24
Trav8n-2A0A075B633 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Trav8n-2A0A075B633 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav8n-2A0A075B633 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav8n-2A0A075B633 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav8n-2A0A075B633 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.57■□□□□ 0.24
Trav8n-2A0A075B633 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav8n-2A0A075B633 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav8n-2A0A075B633 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.57■□□□□ 0.24
Trav8n-2A0A075B633 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav8n-2A0A075B633 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trav8n-2A0A075B633 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav8n-2A0A075B633 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trav8n-2A0A075B633 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav8n-2A0A075B633 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav8n-2A0A075B633 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trav8n-2A0A075B633 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav8n-2A0A075B633 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav8n-2A0A075B633 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav8n-2A0A075B633 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav8n-2A0A075B633 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trav8n-2A0A075B633 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav8n-2A0A075B633 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Trav8n-2A0A075B633 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trav8n-2A0A075B633 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Trav8n-2A0A075B633 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav8n-2A0A075B633 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav8n-2A0A075B633 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav8n-2A0A075B633 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav8n-2A0A075B633 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav8n-2A0A075B633 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav8n-2A0A075B633 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Trav8n-2A0A075B633 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav8n-2A0A075B633 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav8n-2A0A075B633 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav8n-2A0A075B633 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav8n-2A0A075B633 Gm10013-201ENSMUST00000106074 672 ntBASIC16.55■□□□□ 0.24
Trav8n-2A0A075B633 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.55■□□□□ 0.24
Trav8n-2A0A075B633 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav8n-2A0A075B633 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.55■□□□□ 0.24
Trav8n-2A0A075B633 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav8n-2A0A075B633 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav8n-2A0A075B633 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Trav8n-2A0A075B633 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav8n-2A0A075B633 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Trav8n-2A0A075B633 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav8n-2A0A075B633 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.55■□□□□ 0.24
Trav8n-2A0A075B633 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav8n-2A0A075B633 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav8n-2A0A075B633 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav8n-2A0A075B633 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav8n-2A0A075B633 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav8n-2A0A075B633 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav8n-2A0A075B633 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav8n-2A0A075B633 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.54■□□□□ 0.24
Trav8n-2A0A075B633 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav8n-2A0A075B633 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.54■□□□□ 0.24
Trav8n-2A0A075B633 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.54■□□□□ 0.24
Trav8n-2A0A075B633 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav8n-2A0A075B633 Gm10819-201ENSMUST00000099988 561 ntBASIC16.54■□□□□ 0.24
Trav8n-2A0A075B633 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav8n-2A0A075B633 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav8n-2A0A075B633 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav8n-2A0A075B633 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav8n-2A0A075B633 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trav8n-2A0A075B633 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trav8n-2A0A075B633 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trav8n-2A0A075B633 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav8n-2A0A075B633 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav8n-2A0A075B633 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.53■□□□□ 0.24
Trav8n-2A0A075B633 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav8n-2A0A075B633 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.53■□□□□ 0.24
Trav8n-2A0A075B633 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.53■□□□□ 0.24
Trav8n-2A0A075B633 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav8n-2A0A075B633 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav8n-2A0A075B633 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav8n-2A0A075B633 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav8n-2A0A075B633 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav8n-2A0A075B633 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trav8n-2A0A075B633 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav8n-2A0A075B633 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav8n-2A0A075B633 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.24
Trav8n-2A0A075B633 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav8n-2A0A075B633 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms