Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC13.3□□□□□ -0.28
Trav16d-dv11A0A075B617 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16d-dv11A0A075B617 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16d-dv11A0A075B617 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16d-dv11A0A075B617 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16d-dv11A0A075B617 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16d-dv11A0A075B617 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16d-dv11A0A075B617 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16d-dv11A0A075B617 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC13.3□□□□□ -0.28
Trav16d-dv11A0A075B617 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16d-dv11A0A075B617 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16d-dv11A0A075B617 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav16d-dv11A0A075B617 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16d-dv11A0A075B617 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav16d-dv11A0A075B617 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16d-dv11A0A075B617 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav16d-dv11A0A075B617 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16d-dv11A0A075B617 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16d-dv11A0A075B617 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16d-dv11A0A075B617 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav16d-dv11A0A075B617 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16d-dv11A0A075B617 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16d-dv11A0A075B617 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16d-dv11A0A075B617 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav16d-dv11A0A075B617 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav16d-dv11A0A075B617 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav16d-dv11A0A075B617 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav16d-dv11A0A075B617 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav16d-dv11A0A075B617 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav16d-dv11A0A075B617 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav16d-dv11A0A075B617 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC13.29□□□□□ -0.28
Trav16d-dv11A0A075B617 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav16d-dv11A0A075B617 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC13.29□□□□□ -0.28
Trav16d-dv11A0A075B617 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav16d-dv11A0A075B617 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav16d-dv11A0A075B617 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav16d-dv11A0A075B617 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
Trav16d-dv11A0A075B617 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC13.29□□□□□ -0.28
Trav16d-dv11A0A075B617 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
Trav16d-dv11A0A075B617 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav16d-dv11A0A075B617 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav16d-dv11A0A075B617 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav16d-dv11A0A075B617 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav16d-dv11A0A075B617 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Trav16d-dv11A0A075B617 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav16d-dv11A0A075B617 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav16d-dv11A0A075B617 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav16d-dv11A0A075B617 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav16d-dv11A0A075B617 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav16d-dv11A0A075B617 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav16d-dv11A0A075B617 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav16d-dv11A0A075B617 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav16d-dv11A0A075B617 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav16d-dv11A0A075B617 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav16d-dv11A0A075B617 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav16d-dv11A0A075B617 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav16d-dv11A0A075B617 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav16d-dv11A0A075B617 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav16d-dv11A0A075B617 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav16d-dv11A0A075B617 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav16d-dv11A0A075B617 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav16d-dv11A0A075B617 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav16d-dv11A0A075B617 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav16d-dv11A0A075B617 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav16d-dv11A0A075B617 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav16d-dv11A0A075B617 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav16d-dv11A0A075B617 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav16d-dv11A0A075B617 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav16d-dv11A0A075B617 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav16d-dv11A0A075B617 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav16d-dv11A0A075B617 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav16d-dv11A0A075B617 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Trav16d-dv11A0A075B617 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav16d-dv11A0A075B617 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav16d-dv11A0A075B617 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav16d-dv11A0A075B617 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav16d-dv11A0A075B617 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trav16d-dv11A0A075B617 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Trav16d-dv11A0A075B617 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC13.27□□□□□ -0.29
Trav16d-dv11A0A075B617 Gm7417-201ENSMUST00000192950 473 ntBASIC13.27□□□□□ -0.29
Trav16d-dv11A0A075B617 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Trav16d-dv11A0A075B617 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav16d-dv11A0A075B617 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav16d-dv11A0A075B617 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC13.27□□□□□ -0.29
Trav16d-dv11A0A075B617 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav16d-dv11A0A075B617 Gm10209-201ENSMUST00000203397 1607 ntBASIC13.27□□□□□ -0.29
Trav16d-dv11A0A075B617 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav16d-dv11A0A075B617 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trav16d-dv11A0A075B617 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav16d-dv11A0A075B617 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav16d-dv11A0A075B617 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav16d-dv11A0A075B617 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav16d-dv11A0A075B617 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav16d-dv11A0A075B617 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav16d-dv11A0A075B617 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav16d-dv11A0A075B617 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav16d-dv11A0A075B617 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav16d-dv11A0A075B617 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav16d-dv11A0A075B617 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav16d-dv11A0A075B617 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms