Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-1A0A075B5Z8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-1A0A075B5Z8 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-1A0A075B5Z8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-1A0A075B5Z8 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav6-1A0A075B5Z8 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trav6-1A0A075B5Z8 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-1A0A075B5Z8 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-1A0A075B5Z8 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav6-1A0A075B5Z8 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-1A0A075B5Z8 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.54□□□□□ -0.08
Trav6-1A0A075B5Z8 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Trav6-1A0A075B5Z8 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-1A0A075B5Z8 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Trav6-1A0A075B5Z8 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-1A0A075B5Z8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-1A0A075B5Z8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-1A0A075B5Z8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC14.54□□□□□ -0.08
Trav6-1A0A075B5Z8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
Trav6-1A0A075B5Z8 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC14.54□□□□□ -0.08
Trav6-1A0A075B5Z8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-1A0A075B5Z8 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-1A0A075B5Z8 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-1A0A075B5Z8 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-1A0A075B5Z8 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-1A0A075B5Z8 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav6-1A0A075B5Z8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-1A0A075B5Z8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-1A0A075B5Z8 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trav6-1A0A075B5Z8 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-1A0A075B5Z8 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Trav6-1A0A075B5Z8 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-1A0A075B5Z8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-1A0A075B5Z8 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-1A0A075B5Z8 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-1A0A075B5Z8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-1A0A075B5Z8 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Trav6-1A0A075B5Z8 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-1A0A075B5Z8 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.53□□□□□ -0.08
Trav6-1A0A075B5Z8 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-1A0A075B5Z8 AC160393.1-201ENSMUST00000218378 1279 ntBASIC14.53□□□□□ -0.08
Trav6-1A0A075B5Z8 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-1A0A075B5Z8 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-1A0A075B5Z8 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-1A0A075B5Z8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-1A0A075B5Z8 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-1A0A075B5Z8 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6-1A0A075B5Z8 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Trav6-1A0A075B5Z8 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6-1A0A075B5Z8 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6-1A0A075B5Z8 Gm43034-201ENSMUST00000198678 1364 ntBASIC14.52□□□□□ -0.08
Trav6-1A0A075B5Z8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
Trav6-1A0A075B5Z8 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC14.52□□□□□ -0.09
Trav6-1A0A075B5Z8 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-1A0A075B5Z8 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-1A0A075B5Z8 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-1A0A075B5Z8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.09
Trav6-1A0A075B5Z8 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-1A0A075B5Z8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-1A0A075B5Z8 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-1A0A075B5Z8 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-1A0A075B5Z8 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.52□□□□□ -0.09
Trav6-1A0A075B5Z8 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-1A0A075B5Z8 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-1A0A075B5Z8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav6-1A0A075B5Z8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
Trav6-1A0A075B5Z8 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trav6-1A0A075B5Z8 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-1A0A075B5Z8 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-1A0A075B5Z8 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-1A0A075B5Z8 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-1A0A075B5Z8 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-1A0A075B5Z8 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-1A0A075B5Z8 Gm13146-201ENSMUST00000118508 780 ntBASIC14.51□□□□□ -0.09
Trav6-1A0A075B5Z8 Gm12821-201ENSMUST00000120022 600 ntBASIC14.51□□□□□ -0.09
Trav6-1A0A075B5Z8 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-1A0A075B5Z8 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-1A0A075B5Z8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-1A0A075B5Z8 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-1A0A075B5Z8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-1A0A075B5Z8 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav6-1A0A075B5Z8 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav6-1A0A075B5Z8 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-1A0A075B5Z8 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-1A0A075B5Z8 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.5□□□□□ -0.09
Trav6-1A0A075B5Z8 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-1A0A075B5Z8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-1A0A075B5Z8 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trav6-1A0A075B5Z8 Gm6139-201ENSMUST00000079261 882 ntBASIC14.5□□□□□ -0.09
Trav6-1A0A075B5Z8 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-1A0A075B5Z8 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-1A0A075B5Z8 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-1A0A075B5Z8 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-1A0A075B5Z8 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-1A0A075B5Z8 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trav6-1A0A075B5Z8 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-1A0A075B5Z8 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-1A0A075B5Z8 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-1A0A075B5Z8 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-1A0A075B5Z8 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms