Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav5-1A0A075B5Z7 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav5-1A0A075B5Z7 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav5-1A0A075B5Z7 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav5-1A0A075B5Z7 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav5-1A0A075B5Z7 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav5-1A0A075B5Z7 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trav5-1A0A075B5Z7 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trav5-1A0A075B5Z7 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trav5-1A0A075B5Z7 Gm15375-201ENSMUST00000119510 849 ntBASIC15.53■□□□□ 0.08
Trav5-1A0A075B5Z7 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav5-1A0A075B5Z7 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.53■□□□□ 0.08
Trav5-1A0A075B5Z7 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.53■□□□□ 0.08
Trav5-1A0A075B5Z7 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav5-1A0A075B5Z7 Gm10616-201ENSMUST00000205285 2127 ntBASIC15.53■□□□□ 0.08
Trav5-1A0A075B5Z7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav5-1A0A075B5Z7 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trav5-1A0A075B5Z7 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav5-1A0A075B5Z7 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.53■□□□□ 0.08
Trav5-1A0A075B5Z7 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
Trav5-1A0A075B5Z7 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav5-1A0A075B5Z7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav5-1A0A075B5Z7 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav5-1A0A075B5Z7 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav5-1A0A075B5Z7 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav5-1A0A075B5Z7 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav5-1A0A075B5Z7 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav5-1A0A075B5Z7 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav5-1A0A075B5Z7 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav5-1A0A075B5Z7 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.52■□□□□ 0.08
Trav5-1A0A075B5Z7 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.52■□□□□ 0.08
Trav5-1A0A075B5Z7 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.52■□□□□ 0.08
Trav5-1A0A075B5Z7 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.52■□□□□ 0.08
Trav5-1A0A075B5Z7 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC15.52■□□□□ 0.08
Trav5-1A0A075B5Z7 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.52■□□□□ 0.08
Trav5-1A0A075B5Z7 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Trav5-1A0A075B5Z7 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav5-1A0A075B5Z7 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.52■□□□□ 0.07
Trav5-1A0A075B5Z7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav5-1A0A075B5Z7 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav5-1A0A075B5Z7 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav5-1A0A075B5Z7 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav5-1A0A075B5Z7 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav5-1A0A075B5Z7 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav5-1A0A075B5Z7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav5-1A0A075B5Z7 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav5-1A0A075B5Z7 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Trav5-1A0A075B5Z7 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav5-1A0A075B5Z7 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC15.51■□□□□ 0.07
Trav5-1A0A075B5Z7 Mtag2-201ENSMUST00000058665 714 ntBASIC15.51■□□□□ 0.07
Trav5-1A0A075B5Z7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav5-1A0A075B5Z7 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav5-1A0A075B5Z7 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav5-1A0A075B5Z7 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav5-1A0A075B5Z7 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trav5-1A0A075B5Z7 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav5-1A0A075B5Z7 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav5-1A0A075B5Z7 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav5-1A0A075B5Z7 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Trav5-1A0A075B5Z7 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav5-1A0A075B5Z7 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav5-1A0A075B5Z7 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav5-1A0A075B5Z7 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav5-1A0A075B5Z7 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trav5-1A0A075B5Z7 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav5-1A0A075B5Z7 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav5-1A0A075B5Z7 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav5-1A0A075B5Z7 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.5■□□□□ 0.07
Trav5-1A0A075B5Z7 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav5-1A0A075B5Z7 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav5-1A0A075B5Z7 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.5■□□□□ 0.07
Trav5-1A0A075B5Z7 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav5-1A0A075B5Z7 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.5■□□□□ 0.07
Trav5-1A0A075B5Z7 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav5-1A0A075B5Z7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav5-1A0A075B5Z7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav5-1A0A075B5Z7 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav5-1A0A075B5Z7 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav5-1A0A075B5Z7 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.49■□□□□ 0.07
Trav5-1A0A075B5Z7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav5-1A0A075B5Z7 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trav5-1A0A075B5Z7 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trav5-1A0A075B5Z7 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav5-1A0A075B5Z7 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trav5-1A0A075B5Z7 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav5-1A0A075B5Z7 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trav5-1A0A075B5Z7 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.49■□□□□ 0.07
Trav5-1A0A075B5Z7 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav5-1A0A075B5Z7 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav5-1A0A075B5Z7 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5-1A0A075B5Z7 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5-1A0A075B5Z7 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5-1A0A075B5Z7 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.48■□□□□ 0.07
Trav5-1A0A075B5Z7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5-1A0A075B5Z7 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5-1A0A075B5Z7 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.48■□□□□ 0.07
Trav5-1A0A075B5Z7 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav5-1A0A075B5Z7 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav5-1A0A075B5Z7 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.48■□□□□ 0.07
Trav5-1A0A075B5Z7 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms