Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav1A0A075B5Z4 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.78■□□□□ 0.28
Trav1A0A075B5Z4 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.78■□□□□ 0.28
Trav1A0A075B5Z4 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav1A0A075B5Z4 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav1A0A075B5Z4 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.78■□□□□ 0.28
Trav1A0A075B5Z4 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav1A0A075B5Z4 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trav1A0A075B5Z4 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trav1A0A075B5Z4 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.77■□□□□ 0.28
Trav1A0A075B5Z4 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav1A0A075B5Z4 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Trav1A0A075B5Z4 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav1A0A075B5Z4 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
Trav1A0A075B5Z4 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.77■□□□□ 0.28
Trav1A0A075B5Z4 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.77■□□□□ 0.28
Trav1A0A075B5Z4 Gm7290-201ENSMUST00000104990 617 ntBASIC16.77■□□□□ 0.28
Trav1A0A075B5Z4 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.77■□□□□ 0.28
Trav1A0A075B5Z4 Gm12918-201ENSMUST00000120234 636 ntBASIC16.77■□□□□ 0.28
Trav1A0A075B5Z4 Gm15710-201ENSMUST00000121821 636 ntBASIC16.77■□□□□ 0.28
Trav1A0A075B5Z4 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trav1A0A075B5Z4 Gm5075-201ENSMUST00000196916 622 ntBASIC16.77■□□□□ 0.28
Trav1A0A075B5Z4 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.77■□□□□ 0.28
Trav1A0A075B5Z4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.77■□□□□ 0.28
Trav1A0A075B5Z4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.77■□□□□ 0.28
Trav1A0A075B5Z4 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav1A0A075B5Z4 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav1A0A075B5Z4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trav1A0A075B5Z4 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.77■□□□□ 0.27
Trav1A0A075B5Z4 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.77■□□□□ 0.27
Trav1A0A075B5Z4 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trav1A0A075B5Z4 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav1A0A075B5Z4 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav1A0A075B5Z4 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav1A0A075B5Z4 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav1A0A075B5Z4 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav1A0A075B5Z4 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav1A0A075B5Z4 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav1A0A075B5Z4 Gm7291-201ENSMUST00000199147 382 ntBASIC16.76■□□□□ 0.27
Trav1A0A075B5Z4 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.76■□□□□ 0.27
Trav1A0A075B5Z4 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.76■□□□□ 0.27
Trav1A0A075B5Z4 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav1A0A075B5Z4 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav1A0A075B5Z4 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav1A0A075B5Z4 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.76■□□□□ 0.27
Trav1A0A075B5Z4 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav1A0A075B5Z4 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav1A0A075B5Z4 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav1A0A075B5Z4 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav1A0A075B5Z4 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav1A0A075B5Z4 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav1A0A075B5Z4 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trav1A0A075B5Z4 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav1A0A075B5Z4 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trav1A0A075B5Z4 Gm6211-202ENSMUST00000167849 925 ntBASIC16.75■□□□□ 0.27
Trav1A0A075B5Z4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav1A0A075B5Z4 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav1A0A075B5Z4 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav1A0A075B5Z4 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav1A0A075B5Z4 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav1A0A075B5Z4 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.75■□□□□ 0.27
Trav1A0A075B5Z4 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav1A0A075B5Z4 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav1A0A075B5Z4 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trav1A0A075B5Z4 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav1A0A075B5Z4 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav1A0A075B5Z4 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
Trav1A0A075B5Z4 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.74■□□□□ 0.27
Trav1A0A075B5Z4 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav1A0A075B5Z4 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Trav1A0A075B5Z4 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trav1A0A075B5Z4 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav1A0A075B5Z4 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.74■□□□□ 0.27
Trav1A0A075B5Z4 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.74■□□□□ 0.27
Trav1A0A075B5Z4 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.74■□□□□ 0.27
Trav1A0A075B5Z4 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav1A0A075B5Z4 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav1A0A075B5Z4 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav1A0A075B5Z4 Idnk-204ENSMUST00000226010 1898 ntBASIC16.73■□□□□ 0.27
Trav1A0A075B5Z4 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav1A0A075B5Z4 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav1A0A075B5Z4 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav1A0A075B5Z4 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav1A0A075B5Z4 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav1A0A075B5Z4 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav1A0A075B5Z4 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav1A0A075B5Z4 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav1A0A075B5Z4 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav1A0A075B5Z4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav1A0A075B5Z4 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav1A0A075B5Z4 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.73■□□□□ 0.27
Trav1A0A075B5Z4 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav1A0A075B5Z4 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.73■□□□□ 0.27
Trav1A0A075B5Z4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.73■□□□□ 0.27
Trav1A0A075B5Z4 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav1A0A075B5Z4 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.73■□□□□ 0.27
Trav1A0A075B5Z4 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav1A0A075B5Z4 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav1A0A075B5Z4 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav1A0A075B5Z4 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms