Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv4A0A075B5I2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv4A0A075B5I2 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trbv4A0A075B5I2 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv4A0A075B5I2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv4A0A075B5I2 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv4A0A075B5I2 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.12■□□□□ 0.49
Trbv4A0A075B5I2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Trbv4A0A075B5I2 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.12■□□□□ 0.49
Trbv4A0A075B5I2 Mir5133-201ENSMUST00000174955 77 ntBASIC18.12■□□□□ 0.49
Trbv4A0A075B5I2 Gm26524-201ENSMUST00000192339 390 ntBASIC18.12■□□□□ 0.49
Trbv4A0A075B5I2 Gm37179-201ENSMUST00000194862 823 ntBASIC18.12■□□□□ 0.49
Trbv4A0A075B5I2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trbv4A0A075B5I2 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv4A0A075B5I2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Trbv4A0A075B5I2 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv4A0A075B5I2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv4A0A075B5I2 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv4A0A075B5I2 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv4A0A075B5I2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv4A0A075B5I2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv4A0A075B5I2 Gm15039-201ENSMUST00000118914 875 ntBASIC18.11■□□□□ 0.49
Trbv4A0A075B5I2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv4A0A075B5I2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv4A0A075B5I2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.11■□□□□ 0.49
Trbv4A0A075B5I2 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv4A0A075B5I2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv4A0A075B5I2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv4A0A075B5I2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trbv4A0A075B5I2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.1■□□□□ 0.49
Trbv4A0A075B5I2 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.1■□□□□ 0.49
Trbv4A0A075B5I2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv4A0A075B5I2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv4A0A075B5I2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv4A0A075B5I2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Trbv4A0A075B5I2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv4A0A075B5I2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv4A0A075B5I2 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
Trbv4A0A075B5I2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv4A0A075B5I2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv4A0A075B5I2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv4A0A075B5I2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.09■□□□□ 0.49
Trbv4A0A075B5I2 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv4A0A075B5I2 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv4A0A075B5I2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv4A0A075B5I2 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv4A0A075B5I2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Trbv4A0A075B5I2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv4A0A075B5I2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv4A0A075B5I2 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv4A0A075B5I2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Trbv4A0A075B5I2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv4A0A075B5I2 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trbv4A0A075B5I2 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trbv4A0A075B5I2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trbv4A0A075B5I2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
Trbv4A0A075B5I2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.08■□□□□ 0.49
Trbv4A0A075B5I2 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trbv4A0A075B5I2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv4A0A075B5I2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv4A0A075B5I2 Gm2399-201ENSMUST00000104944 225 ntBASIC18.08■□□□□ 0.48
Trbv4A0A075B5I2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.08■□□□□ 0.48
Trbv4A0A075B5I2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv4A0A075B5I2 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.08■□□□□ 0.48
Trbv4A0A075B5I2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv4A0A075B5I2 Gm44549-201ENSMUST00000208351 577 ntBASIC18.08■□□□□ 0.48
Trbv4A0A075B5I2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.08■□□□□ 0.48
Trbv4A0A075B5I2 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.08■□□□□ 0.48
Trbv4A0A075B5I2 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv4A0A075B5I2 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv4A0A075B5I2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Trbv4A0A075B5I2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv4A0A075B5I2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv4A0A075B5I2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv4A0A075B5I2 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv4A0A075B5I2 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv4A0A075B5I2 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Trbv4A0A075B5I2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv4A0A075B5I2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trbv4A0A075B5I2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.07■□□□□ 0.48
Trbv4A0A075B5I2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trbv4A0A075B5I2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.07■□□□□ 0.48
Trbv4A0A075B5I2 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv4A0A075B5I2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv4A0A075B5I2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv4A0A075B5I2 Gm12933-201ENSMUST00000120203 872 ntBASIC18.07■□□□□ 0.48
Trbv4A0A075B5I2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.07■□□□□ 0.48
Trbv4A0A075B5I2 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.07■□□□□ 0.48
Trbv4A0A075B5I2 Rab3c-203ENSMUST00000224180 967 ntBASIC18.07■□□□□ 0.48
Trbv4A0A075B5I2 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv4A0A075B5I2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv4A0A075B5I2 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Trbv4A0A075B5I2 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv4A0A075B5I2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trbv4A0A075B5I2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv4A0A075B5I2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv4A0A075B5I2 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.06■□□□□ 0.48
Trbv4A0A075B5I2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Trbv4A0A075B5I2 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv4A0A075B5I2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms