Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC6.01□□□□□ -1.45
Lsm1Q8VC85 Gm45424-201ENSMUST00000210575 3300 ntBASIC6.01□□□□□ -1.45
Lsm1Q8VC85 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC6.01□□□□□ -1.45
Lsm1Q8VC85 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC6.01□□□□□ -1.45
Lsm1Q8VC85 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC6.01□□□□□ -1.45
Lsm1Q8VC85 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC6.01□□□□□ -1.45
Lsm1Q8VC85 Gm38105-201ENSMUST00000192112 2621 ntBASIC6.01□□□□□ -1.45
Lsm1Q8VC85 AC159196.3-201ENSMUST00000224307 1841 ntBASIC6.01□□□□□ -1.45
Lsm1Q8VC85 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC6.01□□□□□ -1.45
Lsm1Q8VC85 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC6.01□□□□□ -1.45
Lsm1Q8VC85 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Lsm1Q8VC85 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Lsm1Q8VC85 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Lsm1Q8VC85 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC6.01□□□□□ -1.45
Lsm1Q8VC85 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Lsm1Q8VC85 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Lsm1Q8VC85 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Lsm1Q8VC85 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Lsm1Q8VC85 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Lsm1Q8VC85 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC6.01□□□□□ -1.45
Lsm1Q8VC85 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC6□□□□□ -1.45
Lsm1Q8VC85 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Lsm1Q8VC85 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Lsm1Q8VC85 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Lsm1Q8VC85 AC153729.4-201ENSMUST00000217582 3826 ntBASIC6□□□□□ -1.45
Lsm1Q8VC85 Gm43719-201ENSMUST00000200088 2199 ntBASIC6□□□□□ -1.45
Lsm1Q8VC85 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Lsm1Q8VC85 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC6□□□□□ -1.45
Lsm1Q8VC85 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Lsm1Q8VC85 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Lsm1Q8VC85 Gm44901-201ENSMUST00000208157 3977 ntBASIC6□□□□□ -1.45
Lsm1Q8VC85 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC6□□□□□ -1.45
Lsm1Q8VC85 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC6□□□□□ -1.45
Lsm1Q8VC85 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC6□□□□□ -1.45
Lsm1Q8VC85 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Lsm1Q8VC85 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC6□□□□□ -1.45
Lsm1Q8VC85 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Lsm1Q8VC85 Gm25415-201ENSMUST00000104220 132 ntBASIC6□□□□□ -1.45
Lsm1Q8VC85 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC6□□□□□ -1.45
Lsm1Q8VC85 Gm14847-201ENSMUST00000121978 519 ntBASIC6□□□□□ -1.45
Lsm1Q8VC85 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC6□□□□□ -1.45
Lsm1Q8VC85 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC6□□□□□ -1.45
Lsm1Q8VC85 Gm6081-201ENSMUST00000134472 489 ntBASIC6□□□□□ -1.45
Lsm1Q8VC85 Gm7613-201ENSMUST00000139070 487 ntBASIC6□□□□□ -1.45
Lsm1Q8VC85 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC6□□□□□ -1.45
Lsm1Q8VC85 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC6□□□□□ -1.45
Lsm1Q8VC85 Gm8715-201ENSMUST00000162728 531 ntBASIC6□□□□□ -1.45
Lsm1Q8VC85 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Lsm1Q8VC85 Gm27804-201ENSMUST00000185135 119 ntBASIC6□□□□□ -1.45
Lsm1Q8VC85 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
Lsm1Q8VC85 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC6□□□□□ -1.45
Lsm1Q8VC85 Gm43561-201ENSMUST00000199866 448 ntBASIC6□□□□□ -1.45
Lsm1Q8VC85 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC6□□□□□ -1.45
Lsm1Q8VC85 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC6□□□□□ -1.45
Lsm1Q8VC85 Gm9535-201ENSMUST00000218499 768 ntBASIC6□□□□□ -1.45
Lsm1Q8VC85 Gm31711-201ENSMUST00000220687 196 ntBASIC6□□□□□ -1.45
Lsm1Q8VC85 AC154861.1-201ENSMUST00000223767 800 ntBASIC6□□□□□ -1.45
Lsm1Q8VC85 AV026068-220ENSMUST00000224153 1147 ntBASIC6□□□□□ -1.45
Lsm1Q8VC85 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC6□□□□□ -1.45
Lsm1Q8VC85 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC6□□□□□ -1.45
Lsm1Q8VC85 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC6□□□□□ -1.45
Lsm1Q8VC85 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC6□□□□□ -1.45
Lsm1Q8VC85 Gm43386-201ENSMUST00000199654 4001 ntBASIC6□□□□□ -1.45
Lsm1Q8VC85 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Lsm1Q8VC85 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Lsm1Q8VC85 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Lsm1Q8VC85 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC6□□□□□ -1.45
Lsm1Q8VC85 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Lsm1Q8VC85 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Lsm1Q8VC85 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC6□□□□□ -1.45
Lsm1Q8VC85 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Lsm1Q8VC85 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
Lsm1Q8VC85 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Lsm1Q8VC85 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Lsm1Q8VC85 Gm5949-201ENSMUST00000213468 1421 ntBASIC5.99□□□□□ -1.45
Lsm1Q8VC85 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Lsm1Q8VC85 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC5.99□□□□□ -1.45
Lsm1Q8VC85 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC5.99□□□□□ -1.45
Lsm1Q8VC85 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Lsm1Q8VC85 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Lsm1Q8VC85 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC5.99□□□□□ -1.45
Lsm1Q8VC85 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Lsm1Q8VC85 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Lsm1Q8VC85 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Lsm1Q8VC85 Gm9239-201ENSMUST00000186942 2557 ntBASIC5.99□□□□□ -1.45
Lsm1Q8VC85 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Lsm1Q8VC85 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Lsm1Q8VC85 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Lsm1Q8VC85 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Lsm1Q8VC85 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Lsm1Q8VC85 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Lsm1Q8VC85 Gm24869-201ENSMUST00000104072 128 ntBASIC5.99□□□□□ -1.45
Lsm1Q8VC85 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Lsm1Q8VC85 Gm13193-201ENSMUST00000117275 225 ntBASIC5.99□□□□□ -1.45
Lsm1Q8VC85 Gm14173-201ENSMUST00000117690 278 ntBASIC5.99□□□□□ -1.45
Lsm1Q8VC85 Gm12175-201ENSMUST00000122081 345 ntBASIC5.99□□□□□ -1.45
Lsm1Q8VC85 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Lsm1Q8VC85 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Lsm1Q8VC85 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
Lsm1Q8VC85 Gm10364-202ENSMUST00000153034 1001 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 97.5 ms