Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm19186-201ENSMUST00000219922 333 ntBASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 AC132121.1-201ENSMUST00000220774 332 ntBASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Gm9237-201ENSMUST00000221499 548 ntBASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 CT030260.1-201ENSMUST00000223243 442 ntBASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 CT030182.4-201ENSMUST00000223647 645 ntBASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 AC125019.1-201ENSMUST00000224809 908 ntBASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 AV026068-229ENSMUST00000225516 595 ntBASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Gm10197-201ENSMUST00000086887 201 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Gm43857-201ENSMUST00000200343 3079 ntBASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 AC162908.1-201ENSMUST00000219164 4563 ntBASIC7.51□□□□□ -1.21
Ccdc9Q8VC31 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Gm43887-201ENSMUST00000204727 3186 ntBASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Lrrc51-203ENSMUST00000106963 835 ntTSL 2 BASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Gm13414-201ENSMUST00000117516 727 ntBASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Gm15188-201ENSMUST00000121264 704 ntBASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Gm15362-201ENSMUST00000121459 388 ntBASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Gm17047-201ENSMUST00000167709 430 ntBASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Gm24949-201ENSMUST00000183609 215 ntBASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Gm18428-201ENSMUST00000194986 791 ntBASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Gm45319-201ENSMUST00000210220 318 ntBASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Gm45764-201ENSMUST00000213047 571 ntTSL 5 BASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Gm18914-201ENSMUST00000214625 616 ntBASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 4930466K18Rik-201ENSMUST00000219458 906 ntBASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Gm19428-202ENSMUST00000220573 1038 ntTSL 5 BASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Gm18405-201ENSMUST00000220743 511 ntBASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Gm1604a-201ENSMUST00000097422 781 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Gm45360-201ENSMUST00000210698 1405 ntBASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 AC192616.2-201ENSMUST00000221482 3841 ntBASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 Gm19024-201ENSMUST00000194681 1319 ntBASIC7.5□□□□□ -1.21
Ccdc9Q8VC31 AC117608.2-201ENSMUST00000224124 1363 ntBASIC7.49□□□□□ -1.21
Ccdc9Q8VC31 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Ccdc9Q8VC31 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ccdc9Q8VC31 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ccdc9Q8VC31 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ccdc9Q8VC31 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC7.49□□□□□ -1.21
Ccdc9Q8VC31 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Ccdc9Q8VC31 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ccdc9Q8VC31 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC7.49□□□□□ -1.21
Ccdc9Q8VC31 Gm13835-201ENSMUST00000118459 685 ntBASIC7.49□□□□□ -1.21
Ccdc9Q8VC31 Gm11484-201ENSMUST00000119808 338 ntBASIC7.49□□□□□ -1.21
Ccdc9Q8VC31 Gm14831-201ENSMUST00000120253 409 ntBASIC7.49□□□□□ -1.21
Ccdc9Q8VC31 Gm16016-201ENSMUST00000120831 550 ntBASIC7.49□□□□□ -1.21
Ccdc9Q8VC31 Gm21990-201ENSMUST00000124692 383 ntBASIC7.49□□□□□ -1.21
Ccdc9Q8VC31 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Ccdc9Q8VC31 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC7.49□□□□□ -1.21
Ccdc9Q8VC31 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC7.49□□□□□ -1.21
Ccdc9Q8VC31 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC7.49□□□□□ -1.21
Ccdc9Q8VC31 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Ccdc9Q8VC31 Gm22915-201ENSMUST00000157615 136 ntBASIC7.49□□□□□ -1.21
Ccdc9Q8VC31 Gm25717-201ENSMUST00000158631 353 ntBASIC7.49□□□□□ -1.21
Ccdc9Q8VC31 Gm20523-201ENSMUST00000174340 1124 ntBASIC7.49□□□□□ -1.21
Ccdc9Q8VC31 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Ccdc9Q8VC31 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Ccdc9Q8VC31 Gm36928-201ENSMUST00000192466 694 ntBASIC7.49□□□□□ -1.21
Ccdc9Q8VC31 Gm37325-201ENSMUST00000194971 694 ntBASIC7.49□□□□□ -1.21
Ccdc9Q8VC31 Gm37017-201ENSMUST00000195266 747 ntBASIC7.49□□□□□ -1.21
Ccdc9Q8VC31 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Ccdc9Q8VC31 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC7.49□□□□□ -1.21
Ccdc9Q8VC31 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC7.49□□□□□ -1.21
Ccdc9Q8VC31 Gm18586-201ENSMUST00000217265 518 ntBASIC7.49□□□□□ -1.21
Ccdc9Q8VC31 CT010431.1-201ENSMUST00000221249 1080 ntBASIC7.49□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms