Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC7.47□□□□□ -1.21
Vps53Q8CCB4 Gm38368-201ENSMUST00000193181 1335 ntBASIC7.47□□□□□ -1.21
Vps53Q8CCB4 Gm44039-201ENSMUST00000204192 2246 ntBASIC7.47□□□□□ -1.21
Vps53Q8CCB4 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC7.47□□□□□ -1.21
Vps53Q8CCB4 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Vps53Q8CCB4 AC155710.1-201ENSMUST00000219913 1353 ntBASIC7.46□□□□□ -1.21
Vps53Q8CCB4 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
Vps53Q8CCB4 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.21
Vps53Q8CCB4 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Vps53Q8CCB4 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Vps53Q8CCB4 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC7.46□□□□□ -1.22
Vps53Q8CCB4 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Vps53Q8CCB4 Gm11821-201ENSMUST00000117335 979 ntBASIC7.46□□□□□ -1.22
Vps53Q8CCB4 Gm14614-201ENSMUST00000119873 384 ntBASIC7.46□□□□□ -1.22
Vps53Q8CCB4 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC7.46□□□□□ -1.22
Vps53Q8CCB4 Gm12752-201ENSMUST00000121657 811 ntBASIC7.46□□□□□ -1.22
Vps53Q8CCB4 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC7.46□□□□□ -1.22
Vps53Q8CCB4 Gm25387-201ENSMUST00000157813 132 ntBASIC7.46□□□□□ -1.22
Vps53Q8CCB4 Gm25550-201ENSMUST00000158079 128 ntBASIC7.46□□□□□ -1.22
Vps53Q8CCB4 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Vps53Q8CCB4 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC7.46□□□□□ -1.22
Vps53Q8CCB4 Gm25026-201ENSMUST00000175017 188 ntBASIC7.46□□□□□ -1.22
Vps53Q8CCB4 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC7.46□□□□□ -1.22
Vps53Q8CCB4 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC7.46□□□□□ -1.22
Vps53Q8CCB4 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC7.46□□□□□ -1.22
Vps53Q8CCB4 Gm28455-201ENSMUST00000189105 1290 ntBASIC7.46□□□□□ -1.22
Vps53Q8CCB4 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC7.46□□□□□ -1.22
Vps53Q8CCB4 Gm28620-201ENSMUST00000190463 439 ntBASIC7.46□□□□□ -1.22
Vps53Q8CCB4 Gm37809-201ENSMUST00000195050 931 ntBASIC7.46□□□□□ -1.22
Vps53Q8CCB4 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC7.46□□□□□ -1.22
Vps53Q8CCB4 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Vps53Q8CCB4 Gm32983-201ENSMUST00000208500 505 ntBASIC7.46□□□□□ -1.22
Vps53Q8CCB4 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC7.46□□□□□ -1.22
Vps53Q8CCB4 AC112680.2-201ENSMUST00000213119 595 ntBASIC7.46□□□□□ -1.22
Vps53Q8CCB4 AC154219.1-201ENSMUST00000220764 1262 ntBASIC7.46□□□□□ -1.22
Vps53Q8CCB4 AC154573.2-201ENSMUST00000224174 378 ntBASIC7.46□□□□□ -1.22
Vps53Q8CCB4 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Vps53Q8CCB4 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Vps53Q8CCB4 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Vps53Q8CCB4 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Vps53Q8CCB4 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Vps53Q8CCB4 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Vps53Q8CCB4 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC7.46□□□□□ -1.22
Vps53Q8CCB4 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Vps53Q8CCB4 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Vps53Q8CCB4 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Vps53Q8CCB4 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC7.46□□□□□ -1.22
Vps53Q8CCB4 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Vps53Q8CCB4 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Vps53Q8CCB4 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Vps53Q8CCB4 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Vps53Q8CCB4 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Gm13207-201ENSMUST00000119862 773 ntBASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Gm4997-201ENSMUST00000154056 360 ntBASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Gm22530-201ENSMUST00000158820 118 ntBASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Gm8582-201ENSMUST00000164061 789 ntBASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Gm17137-202ENSMUST00000165729 957 ntBASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Gm20432-201ENSMUST00000173716 250 ntBASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Gm20620-201ENSMUST00000177528 168 ntBASIC7.45□□□□□ -1.22
Vps53Q8CCB4 n-R5s109-201ENSMUST00000179195 119 ntBASIC7.45□□□□□ -1.22
Vps53Q8CCB4 n-R5s209-201ENSMUST00000179494 119 ntBASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Gm27468-201ENSMUST00000183577 106 ntBASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Mir6348-201ENSMUST00000183804 120 ntBASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Gm8506-201ENSMUST00000186661 829 ntBASIC7.45□□□□□ -1.22
Vps53Q8CCB4 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Gm7492-201ENSMUST00000201745 725 ntBASIC7.45□□□□□ -1.22
Vps53Q8CCB4 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC7.45□□□□□ -1.22
Vps53Q8CCB4 AC110816.1-201ENSMUST00000218559 980 ntBASIC7.45□□□□□ -1.22
Vps53Q8CCB4 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC7.45□□□□□ -1.22
Vps53Q8CCB4 AC122924.1-201ENSMUST00000222044 163 ntBASIC7.45□□□□□ -1.22
Vps53Q8CCB4 CT030645.2-201ENSMUST00000224321 1012 ntBASIC7.45□□□□□ -1.22
Vps53Q8CCB4 AC158750.1-201ENSMUST00000226163 634 ntBASIC7.45□□□□□ -1.22
Vps53Q8CCB4 AC137871.3-201ENSMUST00000226628 225 ntBASIC7.45□□□□□ -1.22
Vps53Q8CCB4 AC151902.1-201ENSMUST00000227800 375 ntBASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC7.45□□□□□ -1.22
Vps53Q8CCB4 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
Vps53Q8CCB4 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms