Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Trub1Q8C0D0 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Gm11271-201ENSMUST00000116054 440 ntBASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Gm22714-201ENSMUST00000116894 78 ntBASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Gm13811-201ENSMUST00000117800 256 ntBASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Gm6067-201ENSMUST00000121648 491 ntBASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Gm29111-201ENSMUST00000188823 696 ntBASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Gm28584-201ENSMUST00000191489 696 ntBASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Ighv5-21-201ENSMUST00000191935 295 ntBASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Gm38138-201ENSMUST00000193274 696 ntBASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Gm37991-201ENSMUST00000194297 696 ntBASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Gm17994-201ENSMUST00000209260 533 ntBASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Gm19212-201ENSMUST00000216642 862 ntBASIC6.35□□□□□ -1.39
Trub1Q8C0D0 CT010431.1-201ENSMUST00000221249 1080 ntBASIC6.35□□□□□ -1.39
Trub1Q8C0D0 AV026068-218ENSMUST00000223980 575 ntBASIC6.35□□□□□ -1.39
Trub1Q8C0D0 AC164295.1-201ENSMUST00000224861 186 ntBASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trub1Q8C0D0 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Trub1Q8C0D0 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Trub1Q8C0D0 AC121960.2-201ENSMUST00000227349 3446 ntBASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Gm43874-201ENSMUST00000204853 2798 ntBASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Trub1Q8C0D0 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC6.34□□□□□ -1.39
Trub1Q8C0D0 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trub1Q8C0D0 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trub1Q8C0D0 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
Trub1Q8C0D0 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Trub1Q8C0D0 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trub1Q8C0D0 Gm44229-201ENSMUST00000203211 2487 ntBASIC6.34□□□□□ -1.39
Trub1Q8C0D0 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trub1Q8C0D0 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Trub1Q8C0D0 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trub1Q8C0D0 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Trub1Q8C0D0 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Trub1Q8C0D0 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC6.34□□□□□ -1.39
Trub1Q8C0D0 Gm24069-201ENSMUST00000104512 127 ntBASIC6.34□□□□□ -1.39
Trub1Q8C0D0 Gm14331-201ENSMUST00000120396 409 ntBASIC6.34□□□□□ -1.39
Trub1Q8C0D0 Gm12026-201ENSMUST00000120961 1024 ntBASIC6.34□□□□□ -1.39
Trub1Q8C0D0 Gm14515-201ENSMUST00000121327 216 ntBASIC6.34□□□□□ -1.39
Trub1Q8C0D0 Gm8722-201ENSMUST00000121466 769 ntBASIC6.34□□□□□ -1.39
Trub1Q8C0D0 Gm4764-201ENSMUST00000130207 1233 ntBASIC6.34□□□□□ -1.39
Trub1Q8C0D0 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Trub1Q8C0D0 Gm24812-201ENSMUST00000175315 284 ntBASIC6.34□□□□□ -1.39
Trub1Q8C0D0 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC6.34□□□□□ -1.39
Trub1Q8C0D0 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC6.34□□□□□ -1.39
Trub1Q8C0D0 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Trub1Q8C0D0 Gm3544-201ENSMUST00000196129 305 ntBASIC6.34□□□□□ -1.39
Trub1Q8C0D0 Gm7492-201ENSMUST00000201745 725 ntBASIC6.34□□□□□ -1.39
Trub1Q8C0D0 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Trub1Q8C0D0 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC6.34□□□□□ -1.39
Trub1Q8C0D0 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC6.34□□□□□ -1.39
Trub1Q8C0D0 Gm8290-201ENSMUST00000218202 477 ntBASIC6.34□□□□□ -1.39
Trub1Q8C0D0 AC154646.1-201ENSMUST00000225011 1092 ntBASIC6.34□□□□□ -1.39
Trub1Q8C0D0 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trub1Q8C0D0 Gm24032-201ENSMUST00000083932 159 ntBASIC6.34□□□□□ -1.39
Trub1Q8C0D0 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC6.34□□□□□ -1.39
Trub1Q8C0D0 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trub1Q8C0D0 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trub1Q8C0D0 Gm11516-201ENSMUST00000118450 1582 ntBASIC6.34□□□□□ -1.39
Trub1Q8C0D0 Gm43577-201ENSMUST00000197090 3344 ntBASIC6.34□□□□□ -1.39
Trub1Q8C0D0 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
Trub1Q8C0D0 AC116950.1-201ENSMUST00000226322 3250 ntBASIC6.34□□□□□ -1.39
Trub1Q8C0D0 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trub1Q8C0D0 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trub1Q8C0D0 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Trub1Q8C0D0 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Trub1Q8C0D0 Gm42513-201ENSMUST00000197831 2119 ntBASIC6.34□□□□□ -1.4
Trub1Q8C0D0 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC6.34□□□□□ -1.4
Trub1Q8C0D0 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.4
Trub1Q8C0D0 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Trub1Q8C0D0 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
Trub1Q8C0D0 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Trub1Q8C0D0 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms