Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Nup98Q6PFD9 Gm884-202ENSMUST00000167262 4576 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Nup98Q6PFD9 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Nup98Q6PFD9 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Gm44416-201ENSMUST00000204055 2066 ntBASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Onecut2-201ENSMUST00000115145 13389 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Onecut2-202ENSMUST00000175965 13391 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 AC165080.3-201ENSMUST00000217162 3116 ntBASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Gm13489-201ENSMUST00000121234 971 ntBASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Gm22636-201ENSMUST00000158142 275 ntBASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Gm27679-201ENSMUST00000184612 84 ntBASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Gm8419-201ENSMUST00000189886 412 ntBASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Gm29551-201ENSMUST00000190913 698 ntBASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 AC166369.2-201ENSMUST00000228403 308 ntBASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Usf3-202ENSMUST00000119746 12708 ntAPPRIS P2 TSL 5 BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Gm19125-201ENSMUST00000188408 1383 ntBASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Ap5m1-208ENSMUST00000228238 3514 ntBASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Cdon-201ENSMUST00000042842 7213 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Gm7205-201ENSMUST00000196032 1323 ntBASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
Nup98Q6PFD9 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Gm38451-201ENSMUST00000208329 2646 ntBASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Gm25433-201ENSMUST00000158283 286 ntBASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Gm8185-201ENSMUST00000160999 669 ntBASIC7.22□□□□□ -1.25
Nup98Q6PFD9 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Fer1l6-203ENSMUST00000161028 5714 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Chd8-201ENSMUST00000089752 8190 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 AC158595.1-201ENSMUST00000217989 1435 ntBASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Gm8750-201ENSMUST00000173278 1537 ntBASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Sla-202ENSMUST00000164163 2952 ntAPPRIS P3 TSL 5 BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Ncor1-205ENSMUST00000101067 7243 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Nup98Q6PFD9 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms