Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Upf3bQ3ULL6 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Upf3bQ3ULL6 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC6.65□□□□□ -1.34
Upf3bQ3ULL6 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC6.65□□□□□ -1.34
Upf3bQ3ULL6 AC155298.1-201ENSMUST00000225350 3250 ntBASIC6.65□□□□□ -1.34
Upf3bQ3ULL6 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
Upf3bQ3ULL6 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Upf3bQ3ULL6 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Upf3bQ3ULL6 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
Upf3bQ3ULL6 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Upf3bQ3ULL6 Gm14849-201ENSMUST00000122293 2846 ntBASIC6.65□□□□□ -1.35
Upf3bQ3ULL6 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.35
Upf3bQ3ULL6 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC6.65□□□□□ -1.35
Upf3bQ3ULL6 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Upf3bQ3ULL6 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Upf3bQ3ULL6 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.35
Upf3bQ3ULL6 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Upf3bQ3ULL6 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Upf3bQ3ULL6 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Gm38085-201ENSMUST00000195785 3062 ntBASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Gm10258-201ENSMUST00000091270 2123 ntBASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 AC125328.1-201ENSMUST00000226812 2265 ntBASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Gm25415-201ENSMUST00000104220 132 ntBASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Gm11462-201ENSMUST00000117749 562 ntBASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Gm14098-201ENSMUST00000119295 623 ntBASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Gm12399-201ENSMUST00000121475 446 ntBASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Calr-ps-201ENSMUST00000121776 485 ntBASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Gm5125-201ENSMUST00000148614 624 ntBASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Gm3344-201ENSMUST00000169610 603 ntBASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Gm27005-201ENSMUST00000182783 921 ntBASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Rps12l1-201ENSMUST00000183090 399 ntBASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Gm37189-201ENSMUST00000192131 298 ntBASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Gm19653-201ENSMUST00000204326 1039 ntBASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Gm5055-201ENSMUST00000215697 581 ntBASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 CT025579.4-201ENSMUST00000224598 627 ntBASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Gm37106-201ENSMUST00000193760 1532 ntBASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Gm8401-201ENSMUST00000120248 1739 ntBASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC6.64□□□□□ -1.35
Upf3bQ3ULL6 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Upf3bQ3ULL6 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Upf3bQ3ULL6 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Upf3bQ3ULL6 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Upf3bQ3ULL6 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Upf3bQ3ULL6 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
Upf3bQ3ULL6 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC6.63□□□□□ -1.35
Upf3bQ3ULL6 Gm22714-201ENSMUST00000116894 78 ntBASIC6.63□□□□□ -1.35
Upf3bQ3ULL6 Gm13702-201ENSMUST00000118542 825 ntBASIC6.63□□□□□ -1.35
Upf3bQ3ULL6 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC6.63□□□□□ -1.35
Upf3bQ3ULL6 Gm13854-201ENSMUST00000121183 1679 ntBASIC6.63□□□□□ -1.35
Upf3bQ3ULL6 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC6.63□□□□□ -1.35
Upf3bQ3ULL6 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC6.63□□□□□ -1.35
Upf3bQ3ULL6 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC6.63□□□□□ -1.35
Upf3bQ3ULL6 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Upf3bQ3ULL6 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Upf3bQ3ULL6 Gm24369-201ENSMUST00000175387 96 ntBASIC6.63□□□□□ -1.35
Upf3bQ3ULL6 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Upf3bQ3ULL6 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms