Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Scn1bP97952 Gm44242-201ENSMUST00000204212 2721 ntBASIC5.75□□□□□ -1.49
Scn1bP97952 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
Scn1bP97952 Gm38137-201ENSMUST00000193735 1401 ntBASIC5.74□□□□□ -1.49
Scn1bP97952 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Scn1bP97952 Gm6818-201ENSMUST00000190556 2558 ntBASIC5.74□□□□□ -1.49
Scn1bP97952 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Scn1bP97952 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Scn1bP97952 Gm45426-201ENSMUST00000209393 3672 ntBASIC5.74□□□□□ -1.49
Scn1bP97952 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Scn1bP97952 Gm22781-201ENSMUST00000104083 137 ntBASIC5.74□□□□□ -1.49
Scn1bP97952 Gm26016-201ENSMUST00000104403 129 ntBASIC5.74□□□□□ -1.49
Scn1bP97952 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Scn1bP97952 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC5.74□□□□□ -1.49
Scn1bP97952 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC5.74□□□□□ -1.49
Scn1bP97952 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC5.74□□□□□ -1.49
Scn1bP97952 Gm12072-201ENSMUST00000118293 715 ntBASIC5.74□□□□□ -1.49
Scn1bP97952 Gm12442-201ENSMUST00000118372 338 ntBASIC5.74□□□□□ -1.49
Scn1bP97952 Gm4234-201ENSMUST00000119747 714 ntBASIC5.74□□□□□ -1.49
Scn1bP97952 Gm14038-201ENSMUST00000121500 807 ntBASIC5.74□□□□□ -1.49
Scn1bP97952 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Scn1bP97952 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Scn1bP97952 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC5.74□□□□□ -1.49
Scn1bP97952 Mir1929-201ENSMUST00000158635 93 ntBASIC5.74□□□□□ -1.49
Scn1bP97952 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Scn1bP97952 Gm24756-201ENSMUST00000177002 96 ntBASIC5.74□□□□□ -1.49
Scn1bP97952 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC5.74□□□□□ -1.49
Scn1bP97952 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Scn1bP97952 Gm27152-201ENSMUST00000183828 99 ntBASIC5.74□□□□□ -1.49
Scn1bP97952 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Scn1bP97952 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Scn1bP97952 Gm37720-201ENSMUST00000195497 1241 ntBASIC5.74□□□□□ -1.49
Scn1bP97952 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC5.74□□□□□ -1.49
Scn1bP97952 Gm2142-201ENSMUST00000197899 589 ntBASIC5.74□□□□□ -1.49
Scn1bP97952 Gm42938-201ENSMUST00000198414 1072 ntBASIC5.74□□□□□ -1.49
Scn1bP97952 Gm5314-201ENSMUST00000204852 466 ntBASIC5.74□□□□□ -1.49
Scn1bP97952 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC5.74□□□□□ -1.49
Scn1bP97952 Gm44979-201ENSMUST00000206218 287 ntBASIC5.74□□□□□ -1.49
Scn1bP97952 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC5.74□□□□□ -1.49
Scn1bP97952 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC5.74□□□□□ -1.49
Scn1bP97952 CT009539.1-201ENSMUST00000226465 220 ntBASIC5.74□□□□□ -1.49
Scn1bP97952 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC5.74□□□□□ -1.49
Scn1bP97952 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Scn1bP97952 AC122408.2-201ENSMUST00000217901 1391 ntBASIC5.74□□□□□ -1.49
Scn1bP97952 Gm44286-201ENSMUST00000204098 1487 ntBASIC5.74□□□□□ -1.49
Scn1bP97952 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.74□□□□□ -1.49
Scn1bP97952 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Scn1bP97952 Fam26d-202ENSMUST00000218239 3075 ntBASIC5.74□□□□□ -1.49
Scn1bP97952 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.74□□□□□ -1.49
Scn1bP97952 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Scn1bP97952 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC5.74□□□□□ -1.49
Scn1bP97952 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Scn1bP97952 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Scn1bP97952 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Scn1bP97952 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Scn1bP97952 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
Scn1bP97952 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Scn1bP97952 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Scn1bP97952 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Scn1bP97952 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Scn1bP97952 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Scn1bP97952 Gm28320-201ENSMUST00000187777 2273 ntBASIC5.73□□□□□ -1.49
Scn1bP97952 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Scn1bP97952 Gm43025-201ENSMUST00000201764 1886 ntBASIC5.73□□□□□ -1.49
Scn1bP97952 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Scn1bP97952 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Scn1bP97952 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Scn1bP97952 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC5.73□□□□□ -1.49
Scn1bP97952 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Scn1bP97952 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Scn1bP97952 Ifna14-201ENSMUST00000102808 570 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Scn1bP97952 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Scn1bP97952 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Scn1bP97952 Gm25546-201ENSMUST00000103977 132 ntBASIC5.73□□□□□ -1.49
Scn1bP97952 Gm26417-201ENSMUST00000104274 135 ntBASIC5.73□□□□□ -1.49
Scn1bP97952 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Scn1bP97952 Gm5601-201ENSMUST00000118909 972 ntBASIC5.73□□□□□ -1.49
Scn1bP97952 Gm11653-201ENSMUST00000119992 1009 ntBASIC5.73□□□□□ -1.49
Scn1bP97952 Gm14998-201ENSMUST00000120502 495 ntBASIC5.73□□□□□ -1.49
Scn1bP97952 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC5.73□□□□□ -1.49
Scn1bP97952 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Scn1bP97952 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Scn1bP97952 Gm22820-201ENSMUST00000157205 329 ntBASIC5.73□□□□□ -1.49
Scn1bP97952 Mir1930-201ENSMUST00000158799 84 ntBASIC5.73□□□□□ -1.49
Scn1bP97952 Gm17022-201ENSMUST00000166415 922 ntBASIC5.73□□□□□ -1.49
Scn1bP97952 Rsph10b-204ENSMUST00000169758 702 ntTSL 5 BASIC5.73□□□□□ -1.49
Scn1bP97952 Gm17223-201ENSMUST00000171413 481 ntBASIC5.73□□□□□ -1.49
Scn1bP97952 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC5.73□□□□□ -1.49
Scn1bP97952 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC5.73□□□□□ -1.49
Scn1bP97952 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Scn1bP97952 Gm21301-201ENSMUST00000189476 699 ntBASIC5.73□□□□□ -1.49
Scn1bP97952 Gm8480-201ENSMUST00000190350 698 ntBASIC5.73□□□□□ -1.49
Scn1bP97952 Gm20690-202ENSMUST00000195126 355 ntBASIC5.73□□□□□ -1.49
Scn1bP97952 Gm6057-201ENSMUST00000195927 314 ntBASIC5.73□□□□□ -1.49
Scn1bP97952 Gm43141-201ENSMUST00000199695 274 ntBASIC5.73□□□□□ -1.49
Scn1bP97952 Dcp2-202ENSMUST00000202306 398 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Scn1bP97952 Gm31663-202ENSMUST00000208481 1190 ntBASIC5.73□□□□□ -1.49
Scn1bP97952 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Scn1bP97952 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Scn1bP97952 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms