Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Gm9403-201ENSMUST00000196299 2181 ntBASIC5.08□□□□□ -1.6
Lmo4P61969 Gm43581-201ENSMUST00000196766 2864 ntBASIC5.08□□□□□ -1.6
Lmo4P61969 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Lmo4P61969 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Lmo4P61969 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
Lmo4P61969 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Lmo4P61969 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Lmo4P61969 Gm44255-201ENSMUST00000203456 2053 ntBASIC5.08□□□□□ -1.6
Lmo4P61969 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Lmo4P61969 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Lmo4P61969 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC5.08□□□□□ -1.6
Lmo4P61969 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC5.08□□□□□ -1.6
Lmo4P61969 AC158388.2-201ENSMUST00000223665 1314 ntBASIC5.08□□□□□ -1.6
Lmo4P61969 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Lmo4P61969 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Lmo4P61969 Gm12193-201ENSMUST00000117250 379 ntBASIC5.08□□□□□ -1.6
Lmo4P61969 Gm14938-201ENSMUST00000119482 943 ntBASIC5.08□□□□□ -1.6
Lmo4P61969 Gm14331-201ENSMUST00000120396 409 ntBASIC5.08□□□□□ -1.6
Lmo4P61969 Gm11848-201ENSMUST00000121207 973 ntBASIC5.08□□□□□ -1.6
Lmo4P61969 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Lmo4P61969 Gm8988-201ENSMUST00000155015 1240 ntBASIC5.08□□□□□ -1.6
Lmo4P61969 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC5.08□□□□□ -1.6
Lmo4P61969 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Lmo4P61969 Gm22599-201ENSMUST00000157597 132 ntBASIC5.08□□□□□ -1.6
Lmo4P61969 Gm23225-201ENSMUST00000158121 114 ntBASIC5.08□□□□□ -1.6
Lmo4P61969 Gm26169-201ENSMUST00000158420 135 ntBASIC5.08□□□□□ -1.6
Lmo4P61969 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC5.08□□□□□ -1.6
Lmo4P61969 Gm9597-201ENSMUST00000171913 602 ntBASIC5.08□□□□□ -1.6
Lmo4P61969 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC5.08□□□□□ -1.6
Lmo4P61969 Gm19560-201ENSMUST00000177510 514 ntBASIC5.08□□□□□ -1.6
Lmo4P61969 Mir7669-201ENSMUST00000183442 58 ntBASIC5.08□□□□□ -1.6
Lmo4P61969 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC5.08□□□□□ -1.6
Lmo4P61969 Gm17934-201ENSMUST00000192818 422 ntBASIC5.08□□□□□ -1.6
Lmo4P61969 Gm37511-201ENSMUST00000192901 294 ntBASIC5.08□□□□□ -1.6
Lmo4P61969 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC5.08□□□□□ -1.6
Lmo4P61969 Gm42753-201ENSMUST00000196718 1268 ntBASIC5.08□□□□□ -1.6
Lmo4P61969 Gm43116-201ENSMUST00000199789 195 ntBASIC5.08□□□□□ -1.6
Lmo4P61969 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC5.08□□□□□ -1.6
Lmo4P61969 Gm5306-201ENSMUST00000203325 757 ntBASIC5.08□□□□□ -1.6
Lmo4P61969 Gm31861-201ENSMUST00000204563 672 ntBASIC5.08□□□□□ -1.6
Lmo4P61969 Gm45196-201ENSMUST00000206751 825 ntBASIC5.08□□□□□ -1.6
Lmo4P61969 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC5.08□□□□□ -1.6
Lmo4P61969 Gm7802-201ENSMUST00000216464 262 ntBASIC5.08□□□□□ -1.6
Lmo4P61969 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Lmo4P61969 Gm18405-201ENSMUST00000220743 511 ntBASIC5.08□□□□□ -1.6
Lmo4P61969 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
Lmo4P61969 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Lmo4P61969 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Lmo4P61969 Gm2531-201ENSMUST00000075609 512 ntBASIC5.08□□□□□ -1.6
Lmo4P61969 Gm22300-201ENSMUST00000082661 126 ntBASIC5.08□□□□□ -1.6
Lmo4P61969 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Lmo4P61969 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Lmo4P61969 Gm38085-201ENSMUST00000195785 3062 ntBASIC5.08□□□□□ -1.6
Lmo4P61969 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Lmo4P61969 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Lmo4P61969 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
Lmo4P61969 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Lmo4P61969 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Lmo4P61969 Gm43637-201ENSMUST00000202206 2926 ntBASIC5.08□□□□□ -1.6
Lmo4P61969 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Lmo4P61969 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC5.08□□□□□ -1.6
Lmo4P61969 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Lmo4P61969 Gm14849-201ENSMUST00000122293 2846 ntBASIC5.08□□□□□ -1.6
Lmo4P61969 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Lmo4P61969 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Lmo4P61969 Gm4994-201ENSMUST00000118379 2187 ntBASIC5.08□□□□□ -1.6
Lmo4P61969 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC5.08□□□□□ -1.6
Lmo4P61969 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Lmo4P61969 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Lmo4P61969 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC5.08□□□□□ -1.6
Lmo4P61969 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Lmo4P61969 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Lmo4P61969 AC156025.2-201ENSMUST00000225907 1533 ntBASIC5.07□□□□□ -1.6
Lmo4P61969 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Lmo4P61969 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Lmo4P61969 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Lmo4P61969 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
Lmo4P61969 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Lmo4P61969 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Lmo4P61969 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC5.07□□□□□ -1.6
Lmo4P61969 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Lmo4P61969 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Lmo4P61969 AC153152.1-201ENSMUST00000221105 2742 ntBASIC5.07□□□□□ -1.6
Lmo4P61969 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Lmo4P61969 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Lmo4P61969 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Lmo4P61969 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Lmo4P61969 Gm20486-201ENSMUST00000101544 128 ntBASIC5.07□□□□□ -1.6
Lmo4P61969 Gm22372-201ENSMUST00000104589 136 ntBASIC5.07□□□□□ -1.6
Lmo4P61969 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC5.07□□□□□ -1.6
Lmo4P61969 Gm649-201ENSMUST00000117284 1054 ntBASIC5.07□□□□□ -1.6
Lmo4P61969 Gm13428-201ENSMUST00000117540 365 ntBASIC5.07□□□□□ -1.6
Lmo4P61969 Gm11972-201ENSMUST00000118514 389 ntBASIC5.07□□□□□ -1.6
Lmo4P61969 Gm14098-201ENSMUST00000119295 623 ntBASIC5.07□□□□□ -1.6
Lmo4P61969 Gm11533-201ENSMUST00000120287 477 ntBASIC5.07□□□□□ -1.6
Lmo4P61969 Gm11852-201ENSMUST00000120806 222 ntBASIC5.07□□□□□ -1.6
Lmo4P61969 Gm13998-201ENSMUST00000120952 335 ntBASIC5.07□□□□□ -1.6
Lmo4P61969 Gm12396-201ENSMUST00000121600 306 ntBASIC5.07□□□□□ -1.6
Lmo4P61969 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Lmo4P61969 Gm6541-201ENSMUST00000165542 561 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms