Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm18940-201ENSMUST00000222518 871 ntBASIC5.18□□□□□ -1.58
Cdx1P18111 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC5.18□□□□□ -1.58
Cdx1P18111 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Cdx1P18111 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Cdx1P18111 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Cdx1P18111 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Cdx1P18111 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Cdx1P18111 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Cdx1P18111 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Cdx1P18111 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Cdx1P18111 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Cdx1P18111 Gm37833-201ENSMUST00000194342 3256 ntBASIC5.18□□□□□ -1.58
Cdx1P18111 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Cdx1P18111 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Cdx1P18111 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Cdx1P18111 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Cdx1P18111 Gm43523-201ENSMUST00000197397 2878 ntBASIC5.18□□□□□ -1.58
Cdx1P18111 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Cdx1P18111 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC5.18□□□□□ -1.58
Cdx1P18111 Gm38248-201ENSMUST00000193744 5783 ntBASIC5.18□□□□□ -1.58
Cdx1P18111 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC5.17□□□□□ -1.58
Cdx1P18111 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Cdx1P18111 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Cdx1P18111 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Cdx1P18111 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Cdx1P18111 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Cdx1P18111 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.17□□□□□ -1.58
Cdx1P18111 Gm7108-201ENSMUST00000118038 3407 ntBASIC5.17□□□□□ -1.58
Cdx1P18111 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Cdx1P18111 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Cdx1P18111 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Cdx1P18111 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Cdx1P18111 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Cdx1P18111 Gm26417-201ENSMUST00000104274 135 ntBASIC5.17□□□□□ -1.58
Cdx1P18111 Gm12939-201ENSMUST00000117303 165 ntBASIC5.17□□□□□ -1.58
Cdx1P18111 Gm14863-201ENSMUST00000119648 307 ntBASIC5.17□□□□□ -1.58
Cdx1P18111 Gm12731-201ENSMUST00000120932 268 ntBASIC5.17□□□□□ -1.58
Cdx1P18111 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC5.17□□□□□ -1.58
Cdx1P18111 Gm10913-201ENSMUST00000133732 463 ntBASIC5.17□□□□□ -1.58
Cdx1P18111 Gm2735-201ENSMUST00000136133 277 ntBASIC5.17□□□□□ -1.58
Cdx1P18111 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC5.17□□□□□ -1.58
Cdx1P18111 Gm8609-201ENSMUST00000182967 998 ntBASIC5.17□□□□□ -1.58
Cdx1P18111 Mir7685-201ENSMUST00000183555 62 ntBASIC5.17□□□□□ -1.58
Cdx1P18111 Gm3605-201ENSMUST00000185858 440 ntBASIC5.17□□□□□ -1.58
Cdx1P18111 Gm29385-201ENSMUST00000186831 363 ntBASIC5.17□□□□□ -1.58
Cdx1P18111 Gm28186-201ENSMUST00000187447 679 ntBASIC5.17□□□□□ -1.58
Cdx1P18111 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC5.17□□□□□ -1.58
Cdx1P18111 Gm5734-201ENSMUST00000189787 913 ntBASIC5.17□□□□□ -1.58
Cdx1P18111 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Cdx1P18111 Gm8860-201ENSMUST00000193160 445 ntBASIC5.17□□□□□ -1.58
Cdx1P18111 Gm8924-201ENSMUST00000197405 1132 ntBASIC5.17□□□□□ -1.58
Cdx1P18111 AC151967.1-201ENSMUST00000198146 76 ntBASIC5.17□□□□□ -1.58
Cdx1P18111 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC5.17□□□□□ -1.58
Cdx1P18111 Gm6649-201ENSMUST00000199743 1165 ntBASIC5.17□□□□□ -1.58
Cdx1P18111 Gm44227-201ENSMUST00000203576 241 ntBASIC5.17□□□□□ -1.58
Cdx1P18111 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC5.17□□□□□ -1.58
Cdx1P18111 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC5.17□□□□□ -1.58
Cdx1P18111 Gm44856-201ENSMUST00000206639 304 ntBASIC5.17□□□□□ -1.58
Cdx1P18111 Gm44559-201ENSMUST00000207177 1012 ntBASIC5.17□□□□□ -1.58
Cdx1P18111 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC5.17□□□□□ -1.58
Cdx1P18111 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC5.17□□□□□ -1.58
Cdx1P18111 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC5.17□□□□□ -1.58
Cdx1P18111 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Cdx1P18111 Gm2754-201ENSMUST00000223383 589 ntBASIC5.17□□□□□ -1.58
Cdx1P18111 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Cdx1P18111 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Cdx1P18111 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Cdx1P18111 Gm5341-201ENSMUST00000058881 489 ntBASIC5.17□□□□□ -1.58
Cdx1P18111 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Cdx1P18111 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Cdx1P18111 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Cdx1P18111 n-R5s169-201ENSMUST00000083110 120 ntBASIC5.17□□□□□ -1.58
Cdx1P18111 Gm16020-201ENSMUST00000084281 210 ntBASIC5.17□□□□□ -1.58
Cdx1P18111 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Cdx1P18111 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Cdx1P18111 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
Cdx1P18111 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Cdx1P18111 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
Cdx1P18111 Gm8853-201ENSMUST00000198366 1344 ntBASIC5.17□□□□□ -1.58
Cdx1P18111 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
Cdx1P18111 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
Cdx1P18111 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Cdx1P18111 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Cdx1P18111 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC5.17□□□□□ -1.58
Cdx1P18111 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Cdx1P18111 AC129308.2-203ENSMUST00000224109 2385 ntBASIC5.16□□□□□ -1.58
Cdx1P18111 Dennd6a-204ENSMUST00000224248 2775 ntBASIC5.16□□□□□ -1.58
Cdx1P18111 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC5.16□□□□□ -1.58
Cdx1P18111 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Cdx1P18111 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
Cdx1P18111 Gm43845-201ENSMUST00000202462 1820 ntBASIC5.16□□□□□ -1.58
Cdx1P18111 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cdx1P18111 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Cdx1P18111 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cdx1P18111 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Cdx1P18111 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Cdx1P18111 Gm38062-201ENSMUST00000192541 1856 ntBASIC5.16□□□□□ -1.58
Cdx1P18111 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cdx1P18111 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Cdx1P18111 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms