Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col1a1P11087 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col1a1P11087 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Col1a1P11087 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Col1a1P11087 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Col1a1P11087 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Col1a1P11087 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col1a1P11087 Gm14783-201ENSMUST00000118900 663 ntBASIC7.28□□□□□ -1.24
Col1a1P11087 Gm13537-201ENSMUST00000120467 267 ntBASIC7.28□□□□□ -1.24
Col1a1P11087 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Col1a1P11087 Gm22492-201ENSMUST00000157192 297 ntBASIC7.28□□□□□ -1.24
Col1a1P11087 Gm25439-201ENSMUST00000158280 131 ntBASIC7.28□□□□□ -1.24
Col1a1P11087 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC7.28□□□□□ -1.24
Col1a1P11087 Mir3080-201ENSMUST00000175010 79 ntBASIC7.28□□□□□ -1.24
Col1a1P11087 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Col1a1P11087 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Col1a1P11087 Gm22917-201ENSMUST00000180116 110 ntBASIC7.28□□□□□ -1.24
Col1a1P11087 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC7.28□□□□□ -1.24
Col1a1P11087 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Col1a1P11087 Gm7832-201ENSMUST00000202613 880 ntBASIC7.28□□□□□ -1.24
Col1a1P11087 Gm4032-201ENSMUST00000210886 487 ntBASIC7.28□□□□□ -1.24
Col1a1P11087 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC7.28□□□□□ -1.24
Col1a1P11087 Gm7768-201ENSMUST00000222988 597 ntBASIC7.28□□□□□ -1.24
Col1a1P11087 AC129537.1-201ENSMUST00000226596 1228 ntBASIC7.28□□□□□ -1.24
Col1a1P11087 AC116319.2-201ENSMUST00000228159 984 ntBASIC7.28□□□□□ -1.24
Col1a1P11087 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col1a1P11087 Mir337-201ENSMUST00000083592 97 ntBASIC7.28□□□□□ -1.24
Col1a1P11087 n-R5s69-201ENSMUST00000083872 119 ntBASIC7.28□□□□□ -1.24
Col1a1P11087 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Col1a1P11087 Gm4973-201ENSMUST00000206925 1334 ntBASIC7.28□□□□□ -1.24
Col1a1P11087 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Col1a1P11087 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col1a1P11087 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Col1a1P11087 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Col1a1P11087 Gm5182-201ENSMUST00000217708 6092 ntBASIC7.28□□□□□ -1.24
Col1a1P11087 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC7.28□□□□□ -1.24
Col1a1P11087 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Col1a1P11087 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col1a1P11087 Gm38085-201ENSMUST00000195785 3062 ntBASIC7.28□□□□□ -1.24
Col1a1P11087 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Col1a1P11087 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Col1a1P11087 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Col1a1P11087 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col1a1P11087 AC164978.1-201ENSMUST00000228608 4011 ntBASIC7.27□□□□□ -1.25
Col1a1P11087 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Col1a1P11087 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col1a1P11087 Gm43279-201ENSMUST00000202376 2512 ntBASIC7.27□□□□□ -1.25
Col1a1P11087 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col1a1P11087 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Col1a1P11087 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC7.27□□□□□ -1.25
Col1a1P11087 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col1a1P11087 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
Col1a1P11087 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
Col1a1P11087 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC7.27□□□□□ -1.25
Col1a1P11087 Gm15531-201ENSMUST00000118062 252 ntBASIC7.27□□□□□ -1.25
Col1a1P11087 Gm11245-201ENSMUST00000119419 1037 ntBASIC7.27□□□□□ -1.25
Col1a1P11087 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC7.27□□□□□ -1.25
Col1a1P11087 Gm12494-201ENSMUST00000121684 521 ntBASIC7.27□□□□□ -1.25
Col1a1P11087 Gm23799-201ENSMUST00000175559 120 ntBASIC7.27□□□□□ -1.25
Col1a1P11087 Mir3090-201ENSMUST00000175597 87 ntBASIC7.27□□□□□ -1.25
Col1a1P11087 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col1a1P11087 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC7.27□□□□□ -1.25
Col1a1P11087 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC7.27□□□□□ -1.25
Col1a1P11087 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC7.27□□□□□ -1.25
Col1a1P11087 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Col1a1P11087 AC102287.1-201ENSMUST00000211412 454 ntBASIC7.27□□□□□ -1.25
Col1a1P11087 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Col1a1P11087 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Col1a1P11087 Gm8613-201ENSMUST00000220383 1077 ntBASIC7.27□□□□□ -1.25
Col1a1P11087 Gm2614-201ENSMUST00000223227 403 ntBASIC7.27□□□□□ -1.25
Col1a1P11087 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC7.27□□□□□ -1.25
Col1a1P11087 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Col1a1P11087 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
Col1a1P11087 Gm37745-201ENSMUST00000193304 8163 ntBASIC7.27□□□□□ -1.25
Col1a1P11087 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col1a1P11087 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Col1a1P11087 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Col1a1P11087 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col1a1P11087 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Col1a1P11087 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col1a1P11087 Cdh23-201ENSMUST00000073242 10688 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Col1a1P11087 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col1a1P11087 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Col1a1P11087 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col1a1P11087 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Col1a1P11087 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC7.26□□□□□ -1.25
Col1a1P11087 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Col1a1P11087 Gm8501-201ENSMUST00000117684 432 ntBASIC7.26□□□□□ -1.25
Col1a1P11087 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC7.26□□□□□ -1.25
Col1a1P11087 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC7.26□□□□□ -1.25
Col1a1P11087 Gm24216-201ENSMUST00000158259 117 ntBASIC7.26□□□□□ -1.25
Col1a1P11087 Gm9671-201ENSMUST00000171502 547 ntBASIC7.26□□□□□ -1.25
Col1a1P11087 Gm44432-201ENSMUST00000203342 938 ntBASIC7.26□□□□□ -1.25
Col1a1P11087 Gm44837-201ENSMUST00000206863 717 ntBASIC7.26□□□□□ -1.25
Col1a1P11087 AC153937.1-201ENSMUST00000218734 412 ntBASIC7.26□□□□□ -1.25
Col1a1P11087 AC170810.1-201ENSMUST00000228267 672 ntBASIC7.26□□□□□ -1.25
Col1a1P11087 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col1a1P11087 Mir134-201ENSMUST00000083492 71 ntBASIC7.26□□□□□ -1.25
Col1a1P11087 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Col1a1P11087 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms