Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Snora21-201ENSMUST00000082967 137 ntBASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 n-R5s60-201ENSMUST00000083299 119 ntBASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Gm10247-201ENSMUST00000090395 333 ntBASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Gm3383-201ENSMUST00000096171 748 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Gm37142-201ENSMUST00000193718 3110 ntBASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Mir760-201ENSMUST00000103257 119 ntBASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Gm23484-201ENSMUST00000104178 131 ntBASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Gm22152-201ENSMUST00000116966 125 ntBASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Gm12393-201ENSMUST00000117084 848 ntBASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Gm15185-201ENSMUST00000117397 746 ntBASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Gm15160-201ENSMUST00000120553 907 ntBASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Gm14741-201ENSMUST00000120777 1009 ntBASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Tvp23bos-201ENSMUST00000148598 1011 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Gm25505-201ENSMUST00000157220 246 ntBASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Gm22555-201ENSMUST00000157801 62 ntBASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Gm9359-201ENSMUST00000163721 1221 ntBASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Gm8895-201ENSMUST00000172300 1223 ntBASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Gm27163-201ENSMUST00000184767 409 ntBASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Gm42823-201ENSMUST00000197975 256 ntTSL 3 BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Gm4860-201ENSMUST00000200368 454 ntBASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Gm8077-201ENSMUST00000209221 1024 ntBASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 CT030166.4-201ENSMUST00000220640 404 ntBASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Gm45965-201ENSMUST00000221192 1284 ntBASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Gm5374-202ENSMUST00000222910 314 ntBASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 CT030182.4-201ENSMUST00000223647 645 ntBASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Zfp874a-208ENSMUST00000225479 1092 ntBASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 AC125405.2-201ENSMUST00000227862 383 ntBASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Gm5436-201ENSMUST00000058103 643 ntBASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Krtap8-1-201ENSMUST00000072280 579 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Rpl27a-ps1-201ENSMUST00000075382 448 ntBASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Olfr715-201ENSMUST00000076958 1131 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 AC165080.3-201ENSMUST00000217162 3116 ntBASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Gm10826-201ENSMUST00000215366 3304 ntBASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Gm9030-201ENSMUST00000218405 2410 ntBASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Gm9029-201ENSMUST00000219232 2410 ntBASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Olfr1441-202ENSMUST00000214153 2078 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Pcdh1F7BJK1 Gm7205-201ENSMUST00000196032 1323 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 149 ms