Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm5942-201ENSMUST00000120046 439 ntBASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Gm25389-201ENSMUST00000157340 286 ntBASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Mir6400-201ENSMUST00000184870 92 ntBASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Gm29138-201ENSMUST00000191444 348 ntBASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Gm43212-201ENSMUST00000198208 394 ntBASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Ikbkap-201ENSMUST00000030140 6160 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Gm43483-201ENSMUST00000196724 2860 ntBASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 CT572985.1-201ENSMUST00000220599 4714 ntBASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Cpt1a-201ENSMUST00000025835 4300 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Olfr1426-204ENSMUST00000219005 2507 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Amy1-202ENSMUST00000106540 1771 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Olfr1378-202ENSMUST00000213259 4324 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Gm15044-201ENSMUST00000120703 598 ntBASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Gm34176-201ENSMUST00000192621 474 ntBASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Gm44539-201ENSMUST00000206010 238 ntBASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Pde1c-205ENSMUST00000166102 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Gm6185-202ENSMUST00000212885 2692 ntTSL 5 BASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Gm37633-201ENSMUST00000192858 2700 ntBASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Vmn1r44-213ENSMUST00000228700 2004 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Mtmr4-203ENSMUST00000119628 4664 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Eif4e2-202ENSMUST00000076362 3394 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Gm38056-201ENSMUST00000193928 5027 ntBASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Gm13149-201ENSMUST00000122071 339 ntBASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Gm24444-201ENSMUST00000157244 308 ntBASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Gm28615-201ENSMUST00000187527 482 ntBASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Gm37670-201ENSMUST00000193622 229 ntBASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Gm8290-201ENSMUST00000218202 477 ntBASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Pdgfrb-202ENSMUST00000115274 5423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Gm12057-201ENSMUST00000117244 1427 ntBASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Cpsf2-201ENSMUST00000047357 5732 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Gm14998-201ENSMUST00000120502 495 ntBASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Gm5734-201ENSMUST00000189787 913 ntBASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Gm43078-201ENSMUST00000197222 168 ntBASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Gm45910-201ENSMUST00000212493 1003 ntBASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Gm2614-201ENSMUST00000223227 403 ntBASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Akap6-202ENSMUST00000219786 4564 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Plec-215ENSMUST00000169108 14853 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Vmn1r51-208ENSMUST00000227876 4160 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Gm45358-201ENSMUST00000209492 2305 ntBASIC5.97□□□□□ -1.45
Col6a3E9PWQ3 Fam114a1-201ENSMUST00000031080 2938 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Col6a3E9PWQ3 Gm43870-201ENSMUST00000205102 4369 ntBASIC5.96□□□□□ -1.45
Col6a3E9PWQ3 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC5.96□□□□□ -1.45
Col6a3E9PWQ3 Gm43561-201ENSMUST00000199866 448 ntBASIC5.96□□□□□ -1.45
Col6a3E9PWQ3 AC131795.1-201ENSMUST00000219632 426 ntBASIC5.96□□□□□ -1.45
Col6a3E9PWQ3 AC102603.1-201ENSMUST00000227481 584 ntBASIC5.96□□□□□ -1.45
Col6a3E9PWQ3 Pkd1l3-203ENSMUST00000212537 6576 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
Col6a3E9PWQ3 AC135119.1-204ENSMUST00000228036 2663 ntBASIC5.96□□□□□ -1.45
Col6a3E9PWQ3 Gm20706-201ENSMUST00000175985 2023 ntBASIC5.96□□□□□ -1.45
Col6a3E9PWQ3 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
Col6a3E9PWQ3 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
Col6a3E9PWQ3 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Col6a3E9PWQ3 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
Col6a3E9PWQ3 Sec16b-202ENSMUST00000086130 4661 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Col6a3E9PWQ3 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms