Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Usf3B2RUQ2 Gm5318-201ENSMUST00000205249 406 ntBASIC5.24□□□□□ -1.57
Usf3B2RUQ2 CT030254.1-201ENSMUST00000225450 1078 ntBASIC5.24□□□□□ -1.57
Usf3B2RUQ2 AC159205.4-201ENSMUST00000225964 704 ntBASIC5.24□□□□□ -1.57
Usf3B2RUQ2 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Usf3B2RUQ2 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Usf3B2RUQ2 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Usf3B2RUQ2 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
Usf3B2RUQ2 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Usf3B2RUQ2 AC155234.1-201ENSMUST00000225610 2823 ntBASIC5.24□□□□□ -1.57
Usf3B2RUQ2 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Usf3B2RUQ2 Gm42989-201ENSMUST00000200646 2306 ntBASIC5.24□□□□□ -1.57
Usf3B2RUQ2 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Usf3B2RUQ2 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC5.24□□□□□ -1.57
Usf3B2RUQ2 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Usf3B2RUQ2 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Usf3B2RUQ2 AC098728.1-202ENSMUST00000226656 2198 ntBASIC5.24□□□□□ -1.57
Usf3B2RUQ2 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Usf3B2RUQ2 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC5.24□□□□□ -1.57
Usf3B2RUQ2 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Usf3B2RUQ2 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Usf3B2RUQ2 AC139350.2-201ENSMUST00000226508 2331 ntBASIC5.24□□□□□ -1.57
Usf3B2RUQ2 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Usf3B2RUQ2 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Usf3B2RUQ2 Gm13702-201ENSMUST00000118542 825 ntBASIC5.24□□□□□ -1.57
Usf3B2RUQ2 Gm13604-201ENSMUST00000119332 482 ntBASIC5.24□□□□□ -1.57
Usf3B2RUQ2 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC5.24□□□□□ -1.57
Usf3B2RUQ2 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC5.24□□□□□ -1.57
Usf3B2RUQ2 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC5.24□□□□□ -1.57
Usf3B2RUQ2 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Usf3B2RUQ2 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Usf3B2RUQ2 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Usf3B2RUQ2 Gm37152-201ENSMUST00000193369 1175 ntBASIC5.24□□□□□ -1.57
Usf3B2RUQ2 Gm37463-201ENSMUST00000193819 796 ntBASIC5.24□□□□□ -1.57
Usf3B2RUQ2 Gm44239-201ENSMUST00000204228 271 ntBASIC5.24□□□□□ -1.57
Usf3B2RUQ2 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC5.24□□□□□ -1.57
Usf3B2RUQ2 Gm17997-201ENSMUST00000211801 840 ntBASIC5.24□□□□□ -1.57
Usf3B2RUQ2 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC5.24□□□□□ -1.57
Usf3B2RUQ2 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Usf3B2RUQ2 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Usf3B2RUQ2 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
Usf3B2RUQ2 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Usf3B2RUQ2 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Usf3B2RUQ2 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Usf3B2RUQ2 AC120347.2-201ENSMUST00000222224 2015 ntBASIC5.24□□□□□ -1.57
Usf3B2RUQ2 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Usf3B2RUQ2 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Gm11787-201ENSMUST00000121996 1050 ntBASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Gm25459-201ENSMUST00000157953 114 ntBASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Gm26381-201ENSMUST00000174895 92 ntBASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Gm29778-201ENSMUST00000201667 466 ntBASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Gm18467-201ENSMUST00000208805 434 ntBASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Gm7780-201ENSMUST00000214787 406 ntBASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Gm21731-201ENSMUST00000079524 489 ntBASIC5.23□□□□□ -1.57
Usf3B2RUQ2 n-R5s56-201ENSMUST00000082521 105 ntBASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 AC155298.1-201ENSMUST00000225350 3250 ntBASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Gm42975-201ENSMUST00000200612 1491 ntBASIC5.23□□□□□ -1.57
Usf3B2RUQ2 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Usf3B2RUQ2 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC5.23□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms