Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
H2afb2S4R1M3 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
H2afb2S4R1M3 AC125328.1-201ENSMUST00000226812 2265 ntBASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
H2afb2S4R1M3 CT009757.5-201ENSMUST00000221858 3425 ntBASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
H2afb2S4R1M3 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Gm38263-201ENSMUST00000195879 3059 ntBASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
H2afb2S4R1M3 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
H2afb2S4R1M3 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Gm13176-201ENSMUST00000117910 477 ntBASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Gm13156-201ENSMUST00000118348 321 ntBASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Gm12369-201ENSMUST00000121343 942 ntBASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Gm23553-201ENSMUST00000157817 295 ntBASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Gm26167-201ENSMUST00000158423 253 ntBASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Gm4152-201ENSMUST00000172675 259 ntBASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Gm27158-201ENSMUST00000183813 238 ntBASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Gm29072-201ENSMUST00000191149 678 ntBASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Gm38030-201ENSMUST00000192376 475 ntBASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Ighv1-29-201ENSMUST00000194116 342 ntBASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Gm42708-201ENSMUST00000196332 905 ntBASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Gm45448-201ENSMUST00000211739 209 ntBASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC6.18□□□□□ -1.42
H2afb2S4R1M3 AC163743.1-201ENSMUST00000224309 270 ntBASIC6.18□□□□□ -1.42
H2afb2S4R1M3 AC158521.1-202ENSMUST00000224352 645 ntBASIC6.18□□□□□ -1.42
H2afb2S4R1M3 AC137902.1-201ENSMUST00000228184 102 ntBASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
H2afb2S4R1M3 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
H2afb2S4R1M3 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
H2afb2S4R1M3 AC156025.2-201ENSMUST00000225907 1533 ntBASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Gm43190-201ENSMUST00000187850 1779 ntBASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC6.18□□□□□ -1.42
H2afb2S4R1M3 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Gm44043-201ENSMUST00000203426 3253 ntBASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Gm38377-201ENSMUST00000193253 3772 ntBASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Gm44440-201ENSMUST00000203139 2373 ntBASIC6.17□□□□□ -1.42
H2afb2S4R1M3 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Gm10062-201ENSMUST00000072180 1470 ntBASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
H2afb2S4R1M3 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Gm14606-201ENSMUST00000117078 1155 ntBASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Gm6977-201ENSMUST00000121568 512 ntBASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Gm13642-201ENSMUST00000121697 381 ntBASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
H2afb2S4R1M3 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
H2afb2S4R1M3 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC6.17□□□□□ -1.42
H2afb2S4R1M3 Gm5947-201ENSMUST00000179156 714 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms