Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.39
Cstf1Q99LC2 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Cstf1Q99LC2 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Cstf1Q99LC2 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Cstf1Q99LC2 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Cstf1Q99LC2 Gm43526-201ENSMUST00000196666 1565 ntBASIC6.4□□□□□ -1.39
Cstf1Q99LC2 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Gm12193-201ENSMUST00000117250 379 ntBASIC6.39□□□□□ -1.39
Cstf1Q99LC2 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC6.39□□□□□ -1.39
Cstf1Q99LC2 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Gm6472-201ENSMUST00000178147 651 ntBASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Gm27853-201ENSMUST00000184176 250 ntBASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Gm28353-201ENSMUST00000186482 570 ntBASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Gm28533-201ENSMUST00000186741 570 ntBASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Gm4332-201ENSMUST00000196114 346 ntBASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Gm42652-201ENSMUST00000199073 614 ntBASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Gm44795-201ENSMUST00000205496 319 ntBASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 AC123832.2-201ENSMUST00000215151 129 ntBASIC6.39□□□□□ -1.39
Cstf1Q99LC2 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC6.39□□□□□ -1.39
Cstf1Q99LC2 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Gm46192-201ENSMUST00000217894 326 ntBASIC6.39□□□□□ -1.39
Cstf1Q99LC2 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 AC153800.1-201ENSMUST00000219212 365 ntBASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 AC154250.1-201ENSMUST00000224775 489 ntBASIC6.39□□□□□ -1.39
Cstf1Q99LC2 AC154634.2-201ENSMUST00000225983 1184 ntBASIC6.39□□□□□ -1.39
Cstf1Q99LC2 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Gm15732-201ENSMUST00000079794 480 ntBASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Gm45290-201ENSMUST00000211177 3890 ntBASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cstf1Q99LC2 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Cstf1Q99LC2 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Cstf1Q99LC2 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cstf1Q99LC2 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cstf1Q99LC2 AC022682.2-202ENSMUST00000224394 3943 ntBASIC6.38□□□□□ -1.39
Cstf1Q99LC2 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cstf1Q99LC2 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cstf1Q99LC2 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cstf1Q99LC2 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Cstf1Q99LC2 Gm20486-201ENSMUST00000101544 128 ntBASIC6.38□□□□□ -1.39
Cstf1Q99LC2 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Cstf1Q99LC2 Gm14745-201ENSMUST00000118480 1096 ntBASIC6.38□□□□□ -1.39
Cstf1Q99LC2 Gm11987-201ENSMUST00000118524 381 ntBASIC6.38□□□□□ -1.39
Cstf1Q99LC2 Gm15237-201ENSMUST00000122104 469 ntBASIC6.38□□□□□ -1.39
Cstf1Q99LC2 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC6.38□□□□□ -1.39
Cstf1Q99LC2 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC6.38□□□□□ -1.39
Cstf1Q99LC2 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cstf1Q99LC2 Gm26037-201ENSMUST00000158150 311 ntBASIC6.38□□□□□ -1.39
Cstf1Q99LC2 Gm16112-201ENSMUST00000159075 382 ntBASIC6.38□□□□□ -1.39
Cstf1Q99LC2 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC6.38□□□□□ -1.39
Cstf1Q99LC2 Gm22690-201ENSMUST00000175054 110 ntBASIC6.38□□□□□ -1.39
Cstf1Q99LC2 Gm23799-201ENSMUST00000175559 120 ntBASIC6.38□□□□□ -1.39
Cstf1Q99LC2 Gm27006-201ENSMUST00000182218 943 ntBASIC6.38□□□□□ -1.39
Cstf1Q99LC2 Mir3473e-201ENSMUST00000183932 110 ntBASIC6.38□□□□□ -1.39
Cstf1Q99LC2 Gm8581-201ENSMUST00000188636 890 ntBASIC6.38□□□□□ -1.39
Cstf1Q99LC2 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC6.38□□□□□ -1.39
Cstf1Q99LC2 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC6.38□□□□□ -1.39
Cstf1Q99LC2 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC6.38□□□□□ -1.39
Cstf1Q99LC2 Gm5110-201ENSMUST00000203122 1063 ntBASIC6.38□□□□□ -1.39
Cstf1Q99LC2 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms