Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
Syne4Q8CII8 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Syne4Q8CII8 Gm26211-201ENSMUST00000158578 129 ntBASIC7.24□□□□□ -1.25
Syne4Q8CII8 Gm23050-201ENSMUST00000158775 165 ntBASIC7.24□□□□□ -1.25
Syne4Q8CII8 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Syne4Q8CII8 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC7.24□□□□□ -1.25
Syne4Q8CII8 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Syne4Q8CII8 Mir5112-201ENSMUST00000174897 60 ntBASIC7.24□□□□□ -1.25
Syne4Q8CII8 Gm22932-201ENSMUST00000175510 72 ntBASIC7.24□□□□□ -1.25
Syne4Q8CII8 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC7.24□□□□□ -1.25
Syne4Q8CII8 Gm26057-201ENSMUST00000178099 165 ntBASIC7.24□□□□□ -1.25
Syne4Q8CII8 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Syne4Q8CII8 Ighv5-19-201ENSMUST00000193466 297 ntBASIC7.24□□□□□ -1.25
Syne4Q8CII8 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC7.24□□□□□ -1.25
Syne4Q8CII8 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Syne4Q8CII8 Gm5886-202ENSMUST00000203957 522 ntBASIC7.24□□□□□ -1.25
Syne4Q8CII8 AC154481.1-201ENSMUST00000223532 331 ntBASIC7.24□□□□□ -1.25
Syne4Q8CII8 CT025667.1-201ENSMUST00000225872 382 ntBASIC7.24□□□□□ -1.25
Syne4Q8CII8 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Syne4Q8CII8 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Syne4Q8CII8 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Syne4Q8CII8 AL450321.1-201ENSMUST00000220600 3550 ntBASIC7.24□□□□□ -1.25
Syne4Q8CII8 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Syne4Q8CII8 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Syne4Q8CII8 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Syne4Q8CII8 Gm38322-201ENSMUST00000194074 2300 ntBASIC7.24□□□□□ -1.25
Syne4Q8CII8 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
Syne4Q8CII8 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC7.24□□□□□ -1.25
Syne4Q8CII8 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC7.24□□□□□ -1.25
Syne4Q8CII8 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Syne4Q8CII8 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Syne4Q8CII8 Gm33167-201ENSMUST00000201933 2643 ntBASIC7.24□□□□□ -1.25
Syne4Q8CII8 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Syne4Q8CII8 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Syne4Q8CII8 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC7.24□□□□□ -1.25
Syne4Q8CII8 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Syne4Q8CII8 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC7.24□□□□□ -1.25
Syne4Q8CII8 Gm7048-201ENSMUST00000199395 1891 ntBASIC7.24□□□□□ -1.25
Syne4Q8CII8 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Syne4Q8CII8 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC7.23□□□□□ -1.25
Syne4Q8CII8 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Syne4Q8CII8 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Syne4Q8CII8 Gm18880-201ENSMUST00000223333 1541 ntBASIC7.23□□□□□ -1.25
Syne4Q8CII8 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Syne4Q8CII8 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Syne4Q8CII8 Gm42653-201ENSMUST00000200644 2839 ntBASIC7.23□□□□□ -1.25
Syne4Q8CII8 Gm25345-201ENSMUST00000104505 133 ntBASIC7.23□□□□□ -1.25
Syne4Q8CII8 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC7.23□□□□□ -1.25
Syne4Q8CII8 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Syne4Q8CII8 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Syne4Q8CII8 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Syne4Q8CII8 Gm15801-201ENSMUST00000120920 522 ntBASIC7.23□□□□□ -1.25
Syne4Q8CII8 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC7.23□□□□□ -1.25
Syne4Q8CII8 Gm8783-201ENSMUST00000159764 522 ntBASIC7.23□□□□□ -1.25
Syne4Q8CII8 Gm17198-201ENSMUST00000171792 1154 ntBASIC7.23□□□□□ -1.25
Syne4Q8CII8 Gm8895-201ENSMUST00000172300 1223 ntBASIC7.23□□□□□ -1.25
Syne4Q8CII8 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Syne4Q8CII8 Gm24957-201ENSMUST00000179604 132 ntBASIC7.23□□□□□ -1.25
Syne4Q8CII8 Mir6367-201ENSMUST00000183385 102 ntBASIC7.23□□□□□ -1.25
Syne4Q8CII8 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Syne4Q8CII8 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Syne4Q8CII8 Gm44582-201ENSMUST00000209125 445 ntBASIC7.23□□□□□ -1.25
Syne4Q8CII8 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC7.23□□□□□ -1.25
Syne4Q8CII8 AC123832.2-201ENSMUST00000215151 129 ntBASIC7.23□□□□□ -1.25
Syne4Q8CII8 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Syne4Q8CII8 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC7.23□□□□□ -1.25
Syne4Q8CII8 Gm19095-201ENSMUST00000220533 730 ntBASIC7.23□□□□□ -1.25
Syne4Q8CII8 AC122251.2-201ENSMUST00000227341 603 ntBASIC7.23□□□□□ -1.25
Syne4Q8CII8 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Syne4Q8CII8 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Syne4Q8CII8 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Syne4Q8CII8 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Syne4Q8CII8 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Syne4Q8CII8 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Syne4Q8CII8 Gm5582-201ENSMUST00000075251 522 ntBASIC7.23□□□□□ -1.25
Syne4Q8CII8 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Syne4Q8CII8 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Syne4Q8CII8 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Syne4Q8CII8 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC7.23□□□□□ -1.25
Syne4Q8CII8 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Syne4Q8CII8 CT025675.1-201ENSMUST00000228171 1567 ntBASIC7.23□□□□□ -1.25
Syne4Q8CII8 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Syne4Q8CII8 Gm14935-201ENSMUST00000121528 1708 ntBASIC7.23□□□□□ -1.25
Syne4Q8CII8 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Syne4Q8CII8 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Syne4Q8CII8 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Syne4Q8CII8 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC7.23□□□□□ -1.25
Syne4Q8CII8 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC7.23□□□□□ -1.25
Syne4Q8CII8 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Syne4Q8CII8 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC7.23□□□□□ -1.25
Syne4Q8CII8 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC7.23□□□□□ -1.25
Syne4Q8CII8 AC135119.1-202ENSMUST00000228435 2203 ntBASIC7.23□□□□□ -1.25
Syne4Q8CII8 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Syne4Q8CII8 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Syne4Q8CII8 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Syne4Q8CII8 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Syne4Q8CII8 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Syne4Q8CII8 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Syne4Q8CII8 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC7.22□□□□□ -1.25
Syne4Q8CII8 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms