Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Gm22231-201ENSMUST00000101027 73 ntBASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Gm12713-201ENSMUST00000118404 764 ntBASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Gm12401-201ENSMUST00000118435 228 ntBASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Gm15967-201ENSMUST00000120027 1116 ntBASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Gm6977-201ENSMUST00000121568 512 ntBASIC7.61□□□□□ -1.19
Brf1Q8CFK2 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Mir1960-201ENSMUST00000157488 78 ntBASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Gm26486-201ENSMUST00000158021 110 ntBASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Gm5066-201ENSMUST00000188479 822 ntBASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Gm19124-201ENSMUST00000191041 832 ntBASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Gm7343-201ENSMUST00000194510 1061 ntBASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Gm17824-201ENSMUST00000197690 805 ntBASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Gm43382-201ENSMUST00000198954 838 ntBASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Gm44845-201ENSMUST00000208773 335 ntBASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 AC142113.2-201ENSMUST00000217425 748 ntBASIC7.61□□□□□ -1.19
Brf1Q8CFK2 AC174082.2-201ENSMUST00000222094 543 ntBASIC7.61□□□□□ -1.19
Brf1Q8CFK2 AC159293.2-201ENSMUST00000222289 424 ntBASIC7.61□□□□□ -1.19
Brf1Q8CFK2 AC158521.1-202ENSMUST00000224352 645 ntBASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Gm26442-201ENSMUST00000082588 153 ntBASIC7.61□□□□□ -1.19
Brf1Q8CFK2 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Gm43526-201ENSMUST00000196666 1565 ntBASIC7.61□□□□□ -1.19
Brf1Q8CFK2 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Gm43113-201ENSMUST00000199713 1754 ntBASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Gm6494-201ENSMUST00000218604 2298 ntBASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 AC141476.1-201ENSMUST00000224988 3387 ntBASIC7.6□□□□□ -1.19
Brf1Q8CFK2 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Brf1Q8CFK2 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Brf1Q8CFK2 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Brf1Q8CFK2 Gm42685-201ENSMUST00000200378 2390 ntBASIC7.6□□□□□ -1.19
Brf1Q8CFK2 Gm37186-201ENSMUST00000195629 2861 ntBASIC7.6□□□□□ -1.19
Brf1Q8CFK2 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Brf1Q8CFK2 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Brf1Q8CFK2 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Brf1Q8CFK2 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Brf1Q8CFK2 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC7.6□□□□□ -1.19
Brf1Q8CFK2 Gm24069-201ENSMUST00000104512 127 ntBASIC7.6□□□□□ -1.19
Brf1Q8CFK2 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
Brf1Q8CFK2 Gm14098-201ENSMUST00000119295 623 ntBASIC7.6□□□□□ -1.19
Brf1Q8CFK2 Gm12813-201ENSMUST00000119615 902 ntBASIC7.6□□□□□ -1.19
Brf1Q8CFK2 Gm25904-201ENSMUST00000158491 143 ntBASIC7.6□□□□□ -1.19
Brf1Q8CFK2 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC7.6□□□□□ -1.19
Brf1Q8CFK2 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC7.6□□□□□ -1.19
Brf1Q8CFK2 Gm9499-201ENSMUST00000180888 964 ntBASIC7.6□□□□□ -1.19
Brf1Q8CFK2 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Brf1Q8CFK2 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Brf1Q8CFK2 Gm38280-201ENSMUST00000192610 158 ntBASIC7.6□□□□□ -1.19
Brf1Q8CFK2 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Brf1Q8CFK2 Gm37477-201ENSMUST00000195215 884 ntBASIC7.6□□□□□ -1.19
Brf1Q8CFK2 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Brf1Q8CFK2 Gm44225-201ENSMUST00000203582 186 ntBASIC7.6□□□□□ -1.19
Brf1Q8CFK2 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC7.6□□□□□ -1.19
Brf1Q8CFK2 Gm45127-201ENSMUST00000205984 1015 ntBASIC7.6□□□□□ -1.19
Brf1Q8CFK2 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC7.6□□□□□ -1.19
Brf1Q8CFK2 Gm45473-201ENSMUST00000211452 616 ntBASIC7.6□□□□□ -1.19
Brf1Q8CFK2 AL645546.2-201ENSMUST00000224526 265 ntBASIC7.6□□□□□ -1.19
Brf1Q8CFK2 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Brf1Q8CFK2 Gm24032-201ENSMUST00000083932 159 ntBASIC7.6□□□□□ -1.19
Brf1Q8CFK2 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Brf1Q8CFK2 Ap5m1-208ENSMUST00000228238 3514 ntBASIC7.6□□□□□ -1.19
Brf1Q8CFK2 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Brf1Q8CFK2 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Brf1Q8CFK2 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 192.2 ms