Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm44258-201ENSMUST00000204925 301 ntBASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Gm44266-201ENSMUST00000205235 500 ntBASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Gm6667-201ENSMUST00000217169 564 ntBASIC8.2□□□□□ -1.1
Trim47Q8C0E3 AC132384.5-201ENSMUST00000218562 226 ntBASIC8.2□□□□□ -1.1
Trim47Q8C0E3 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim47Q8C0E3 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC8.2□□□□□ -1.1
Trim47Q8C0E3 AC134869.2-201ENSMUST00000225788 421 ntBASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Gm26111-201ENSMUST00000083969 106 ntBASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Garnl3-202ENSMUST00000102810 3578 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Gm37078-201ENSMUST00000193314 2009 ntBASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Vmn1r44-213ENSMUST00000228700 2004 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC8.2□□□□□ -1.1
Trim47Q8C0E3 AC169985.1-201ENSMUST00000223648 2439 ntBASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Gm5841-201ENSMUST00000195307 2177 ntBASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Lemd1-205ENSMUST00000188169 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Gm42866-201ENSMUST00000195919 3304 ntBASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Gm6249-201ENSMUST00000211142 3314 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 CT010453.1-201ENSMUST00000226795 2201 ntBASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Akt3-201ENSMUST00000019843 1511 ntTSL 5 BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 AC164433.1-201ENSMUST00000226138 1544 ntBASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 A930030B08Rik-201ENSMUST00000207625 3965 ntBASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Gm26945-201ENSMUST00000183191 2011 ntBASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Gm11488-201ENSMUST00000117277 863 ntBASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Gm16383-201ENSMUST00000118122 232 ntBASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Gm15842-201ENSMUST00000120513 618 ntBASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Gm22480-201ENSMUST00000122568 128 ntBASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Gm2892-201ENSMUST00000145537 711 ntBASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Mir1981-201ENSMUST00000157934 82 ntBASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Gm23505-201ENSMUST00000158989 130 ntBASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Gm6428-201ENSMUST00000161062 345 ntBASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Mir3078-201ENSMUST00000175231 87 ntBASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Gm5147-201ENSMUST00000185999 794 ntBASIC8.19□□□□□ -1.1
Trim47Q8C0E3 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Gm37715-201ENSMUST00000193206 235 ntBASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Gm43096-201ENSMUST00000196173 421 ntBASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Gm29759-201ENSMUST00000205860 327 ntBASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Gm44590-201ENSMUST00000206161 391 ntBASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Gm45497-201ENSMUST00000211701 740 ntBASIC8.19□□□□□ -1.1
Trim47Q8C0E3 AC116589.1-201ENSMUST00000220634 327 ntBASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 AC121137.1-201ENSMUST00000225272 602 ntBASIC8.19□□□□□ -1.1
Trim47Q8C0E3 AC107757.1-201ENSMUST00000226780 357 ntBASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Gm2108-201ENSMUST00000165058 2177 ntBASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Pdgfd-201ENSMUST00000058692 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Zhx3-202ENSMUST00000103112 9109 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Gm7269-201ENSMUST00000210819 1373 ntBASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim47Q8C0E3 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 97.2 ms