Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sf3b2Q3UJB0 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Sf3b2Q3UJB0 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sf3b2Q3UJB0 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Sf3b2Q3UJB0 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Sf3b2Q3UJB0 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sf3b2Q3UJB0 Gm5832-201ENSMUST00000121704 1582 ntBASIC8.35□□□□□ -1.07
Sf3b2Q3UJB0 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC8.35□□□□□ -1.07
Sf3b2Q3UJB0 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Sf3b2Q3UJB0 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sf3b2Q3UJB0 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sf3b2Q3UJB0 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Sf3b2Q3UJB0 Mapk10-202ENSMUST00000112846 2617 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Sf3b2Q3UJB0 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC8.34□□□□□ -1.07
Sf3b2Q3UJB0 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC8.34□□□□□ -1.07
Sf3b2Q3UJB0 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sf3b2Q3UJB0 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sf3b2Q3UJB0 Lyg2-201ENSMUST00000078307 2564 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sf3b2Q3UJB0 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sf3b2Q3UJB0 Gm42630-201ENSMUST00000195908 3448 ntBASIC8.34□□□□□ -1.07
Sf3b2Q3UJB0 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sf3b2Q3UJB0 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
Sf3b2Q3UJB0 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC8.34□□□□□ -1.07
Sf3b2Q3UJB0 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Sf3b2Q3UJB0 Gm15040-201ENSMUST00000118561 1241 ntBASIC8.34□□□□□ -1.07
Sf3b2Q3UJB0 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC8.34□□□□□ -1.07
Sf3b2Q3UJB0 Gm18833-201ENSMUST00000173218 862 ntBASIC8.34□□□□□ -1.07
Sf3b2Q3UJB0 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC8.34□□□□□ -1.07
Sf3b2Q3UJB0 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC8.34□□□□□ -1.07
Sf3b2Q3UJB0 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC8.34□□□□□ -1.07
Sf3b2Q3UJB0 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC8.34□□□□□ -1.07
Sf3b2Q3UJB0 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC8.34□□□□□ -1.07
Sf3b2Q3UJB0 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Sf3b2Q3UJB0 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC8.34□□□□□ -1.07
Sf3b2Q3UJB0 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Sf3b2Q3UJB0 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC8.34□□□□□ -1.07
Sf3b2Q3UJB0 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Sf3b2Q3UJB0 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Sf3b2Q3UJB0 AC151971.3-201ENSMUST00000214694 404 ntBASIC8.34□□□□□ -1.07
Sf3b2Q3UJB0 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Sf3b2Q3UJB0 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sf3b2Q3UJB0 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Sf3b2Q3UJB0 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC8.34□□□□□ -1.07
Sf3b2Q3UJB0 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sf3b2Q3UJB0 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Sf3b2Q3UJB0 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC8.34□□□□□ -1.07
Sf3b2Q3UJB0 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Sf3b2Q3UJB0 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Sf3b2Q3UJB0 Gm42930-201ENSMUST00000200872 3260 ntBASIC8.34□□□□□ -1.08
Sf3b2Q3UJB0 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Mtm1-205ENSMUST00000114617 3338 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Gm43187-201ENSMUST00000200652 2397 ntBASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Gm24173-201ENSMUST00000104130 128 ntBASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Gpbp1l1-202ENSMUST00000106475 2642 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Gm11105-201ENSMUST00000112781 478 ntBASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Gm11885-201ENSMUST00000118473 1428 ntBASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Gm13006-201ENSMUST00000118683 214 ntBASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Gm12482-201ENSMUST00000120435 630 ntBASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Gm13533-201ENSMUST00000121104 177 ntBASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Gm22596-201ENSMUST00000157601 316 ntBASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Gm24685-201ENSMUST00000157764 285 ntBASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Gm24236-201ENSMUST00000157794 134 ntBASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Gm21772-201ENSMUST00000169213 478 ntBASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Gm17126-201ENSMUST00000172276 523 ntBASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Gm37681-201ENSMUST00000193880 727 ntBASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Gm6474-201ENSMUST00000223250 699 ntBASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Gm4951-201ENSMUST00000031549 2645 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Gm43534-201ENSMUST00000197685 2853 ntBASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC8.33□□□□□ -1.08
Sf3b2Q3UJB0 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Sf3b2Q3UJB0 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Sf3b2Q3UJB0 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Sf3b2Q3UJB0 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Sf3b2Q3UJB0 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC8.32□□□□□ -1.08
Sf3b2Q3UJB0 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms