Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC6.06□□□□□ -1.44
Col8a1Q00780 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC6.06□□□□□ -1.44
Col8a1Q00780 Gm3678-201ENSMUST00000218888 492 ntBASIC6.06□□□□□ -1.44
Col8a1Q00780 AC126685.1-201ENSMUST00000221001 121 ntBASIC6.06□□□□□ -1.44
Col8a1Q00780 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC6.06□□□□□ -1.44
Col8a1Q00780 AC187103.4-201ENSMUST00000225399 300 ntBASIC6.06□□□□□ -1.44
Col8a1Q00780 AC105407.1-201ENSMUST00000225684 614 ntBASIC6.06□□□□□ -1.44
Col8a1Q00780 AC154323.2-201ENSMUST00000226557 1151 ntBASIC6.06□□□□□ -1.44
Col8a1Q00780 AC140393.2-201ENSMUST00000226894 943 ntBASIC6.06□□□□□ -1.44
Col8a1Q00780 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Col8a1Q00780 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Col8a1Q00780 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Col8a1Q00780 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC6.06□□□□□ -1.44
Col8a1Q00780 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col8a1Q00780 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col8a1Q00780 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Col8a1Q00780 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col8a1Q00780 Gm43534-201ENSMUST00000197685 2853 ntBASIC6.06□□□□□ -1.44
Col8a1Q00780 Gm37326-201ENSMUST00000192828 3071 ntBASIC6.06□□□□□ -1.44
Col8a1Q00780 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Col8a1Q00780 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Col8a1Q00780 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Col8a1Q00780 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Col8a1Q00780 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col8a1Q00780 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Col8a1Q00780 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Col8a1Q00780 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col8a1Q00780 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Col8a1Q00780 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Col8a1Q00780 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col8a1Q00780 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col8a1Q00780 Satb1-203ENSMUST00000129667 2896 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
Col8a1Q00780 Gm38697-201ENSMUST00000198061 1746 ntBASIC6.05□□□□□ -1.44
Col8a1Q00780 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col8a1Q00780 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col8a1Q00780 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col8a1Q00780 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col8a1Q00780 Gm42973-201ENSMUST00000197913 3200 ntBASIC6.05□□□□□ -1.44
Col8a1Q00780 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC6.05□□□□□ -1.44
Col8a1Q00780 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col8a1Q00780 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col8a1Q00780 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC6.05□□□□□ -1.44
Col8a1Q00780 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col8a1Q00780 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Col8a1Q00780 Mbnl2-203ENSMUST00000226800 3328 ntBASIC6.05□□□□□ -1.44
Col8a1Q00780 AC168056.4-201ENSMUST00000223835 2567 ntBASIC6.05□□□□□ -1.44
Col8a1Q00780 Vmn1r176-202ENSMUST00000226319 2930 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Col8a1Q00780 Gm25785-201ENSMUST00000104129 125 ntBASIC6.05□□□□□ -1.44
Col8a1Q00780 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Col8a1Q00780 Gm14624-201ENSMUST00000117746 192 ntBASIC6.05□□□□□ -1.44
Col8a1Q00780 Gm11501-201ENSMUST00000118039 581 ntBASIC6.05□□□□□ -1.44
Col8a1Q00780 Gm2003-201ENSMUST00000118537 636 ntBASIC6.05□□□□□ -1.44
Col8a1Q00780 Gm4910-201ENSMUST00000119605 366 ntBASIC6.05□□□□□ -1.44
Col8a1Q00780 Gm12955-201ENSMUST00000119689 957 ntBASIC6.05□□□□□ -1.44
Col8a1Q00780 Gm14989-201ENSMUST00000120497 207 ntBASIC6.05□□□□□ -1.44
Col8a1Q00780 Gm13622-201ENSMUST00000120658 433 ntBASIC6.05□□□□□ -1.44
Col8a1Q00780 Gm12593-201ENSMUST00000120981 743 ntBASIC6.05□□□□□ -1.44
Col8a1Q00780 Mir1898-201ENSMUST00000122643 83 ntBASIC6.05□□□□□ -1.44
Col8a1Q00780 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col8a1Q00780 Gm1989-201ENSMUST00000126244 636 ntBASIC6.05□□□□□ -1.44
Col8a1Q00780 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col8a1Q00780 Gm23587-201ENSMUST00000157658 84 ntBASIC6.05□□□□□ -1.44
Col8a1Q00780 Gm24011-201ENSMUST00000157732 268 ntBASIC6.05□□□□□ -1.44
Col8a1Q00780 Gm23225-201ENSMUST00000158121 114 ntBASIC6.05□□□□□ -1.44
Col8a1Q00780 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Col8a1Q00780 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC6.05□□□□□ -1.44
Col8a1Q00780 Gm6726-201ENSMUST00000172786 681 ntBASIC6.05□□□□□ -1.44
Col8a1Q00780 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC6.05□□□□□ -1.44
Col8a1Q00780 Zfp950-206ENSMUST00000178819 171 ntBASIC6.05□□□□□ -1.44
Col8a1Q00780 Gm23186-201ENSMUST00000180078 107 ntBASIC6.05□□□□□ -1.44
Col8a1Q00780 Gm8245-201ENSMUST00000182434 987 ntBASIC6.05□□□□□ -1.44
Col8a1Q00780 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC6.05□□□□□ -1.44
Col8a1Q00780 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC6.05□□□□□ -1.44
Col8a1Q00780 Gm28614-201ENSMUST00000186483 458 ntBASIC6.05□□□□□ -1.44
Col8a1Q00780 Gm38097-201ENSMUST00000192936 439 ntBASIC6.05□□□□□ -1.44
Col8a1Q00780 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC6.05□□□□□ -1.44
Col8a1Q00780 Gm6261-201ENSMUST00000204707 760 ntBASIC6.05□□□□□ -1.44
Col8a1Q00780 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC6.05□□□□□ -1.44
Col8a1Q00780 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC6.05□□□□□ -1.44
Col8a1Q00780 Gm8575-201ENSMUST00000210262 521 ntBASIC6.05□□□□□ -1.44
Col8a1Q00780 AC102139.1-201ENSMUST00000227000 251 ntBASIC6.05□□□□□ -1.44
Col8a1Q00780 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC6.05□□□□□ -1.44
Col8a1Q00780 AC118250.1-201ENSMUST00000228569 875 ntBASIC6.05□□□□□ -1.44
Col8a1Q00780 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col8a1Q00780 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC6.05□□□□□ -1.44
Col8a1Q00780 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col8a1Q00780 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC6.05□□□□□ -1.44
Col8a1Q00780 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col8a1Q00780 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Col8a1Q00780 Mir138-1-201ENSMUST00000083480 99 ntBASIC6.05□□□□□ -1.44
Col8a1Q00780 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col8a1Q00780 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Col8a1Q00780 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC6.05□□□□□ -1.44
Col8a1Q00780 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Col8a1Q00780 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col8a1Q00780 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col8a1Q00780 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col8a1Q00780 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Col8a1Q00780 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col8a1Q00780 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms