Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PrkdcP97313 Helz2-201ENSMUST00000094203 9162 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
PrkdcP97313 Gm26984-201ENSMUST00000182345 3510 ntBASIC4.13□□□□□ -1.75
PrkdcP97313 Vmn1r44-212ENSMUST00000228183 1838 ntBASIC4.13□□□□□ -1.75
PrkdcP97313 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
PrkdcP97313 Gm13681-201ENSMUST00000117925 210 ntBASIC4.13□□□□□ -1.75
PrkdcP97313 Gm15428-201ENSMUST00000121352 333 ntBASIC4.13□□□□□ -1.75
PrkdcP97313 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PrkdcP97313 Mir1946b-201ENSMUST00000157853 133 ntBASIC4.13□□□□□ -1.75
PrkdcP97313 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PrkdcP97313 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PrkdcP97313 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC4.13□□□□□ -1.75
PrkdcP97313 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PrkdcP97313 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PrkdcP97313 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PrkdcP97313 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC4.13□□□□□ -1.75
PrkdcP97313 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PrkdcP97313 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PrkdcP97313 Gm44699-201ENSMUST00000208229 5083 ntTSL 5 BASIC4.13□□□□□ -1.75
PrkdcP97313 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
PrkdcP97313 Umodl1-203ENSMUST00000114555 5041 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
PrkdcP97313 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PrkdcP97313 Hdac4-202ENSMUST00000097644 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PrkdcP97313 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PrkdcP97313 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC4.13□□□□□ -1.75
PrkdcP97313 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC4.13□□□□□ -1.75
PrkdcP97313 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PrkdcP97313 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PrkdcP97313 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
PrkdcP97313 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC4.13□□□□□ -1.75
PrkdcP97313 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PrkdcP97313 Gm9085-201ENSMUST00000119994 1072 ntBASIC4.13□□□□□ -1.75
PrkdcP97313 Gm24217-201ENSMUST00000158260 133 ntBASIC4.13□□□□□ -1.75
PrkdcP97313 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PrkdcP97313 Gm42643-201ENSMUST00000200504 279 ntBASIC4.13□□□□□ -1.75
PrkdcP97313 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC4.13□□□□□ -1.75
PrkdcP97313 Inpp5d-201ENSMUST00000042275 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PrkdcP97313 Katnal1-201ENSMUST00000047257 6157 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PrkdcP97313 Gm37902-201ENSMUST00000192839 1683 ntBASIC4.13□□□□□ -1.75
PrkdcP97313 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PrkdcP97313 AC153152.1-201ENSMUST00000221105 2742 ntBASIC4.13□□□□□ -1.75
PrkdcP97313 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
PrkdcP97313 Tbc1d24-204ENSMUST00000167791 4383 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PrkdcP97313 Zhx3-201ENSMUST00000103111 9563 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PrkdcP97313 Polr3a-201ENSMUST00000026322 4687 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PrkdcP97313 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PrkdcP97313 Gm13416-201ENSMUST00000117264 1612 ntBASIC4.13□□□□□ -1.75
PrkdcP97313 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
PrkdcP97313 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC4.13□□□□□ -1.75
PrkdcP97313 Ap5m1-208ENSMUST00000228238 3514 ntBASIC4.13□□□□□ -1.75
PrkdcP97313 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
PrkdcP97313 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC4.13□□□□□ -1.75
PrkdcP97313 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
PrkdcP97313 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PrkdcP97313 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PrkdcP97313 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC4.13□□□□□ -1.75
PrkdcP97313 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PrkdcP97313 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PrkdcP97313 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC4.13□□□□□ -1.75
PrkdcP97313 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
PrkdcP97313 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
PrkdcP97313 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC4.12□□□□□ -1.75
PrkdcP97313 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
PrkdcP97313 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PrkdcP97313 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
PrkdcP97313 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC4.12□□□□□ -1.75
PrkdcP97313 Celf1-203ENSMUST00000068747 7614 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PrkdcP97313 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
PrkdcP97313 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PrkdcP97313 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PrkdcP97313 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PrkdcP97313 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC4.12□□□□□ -1.75
PrkdcP97313 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC4.12□□□□□ -1.75
PrkdcP97313 Mir6410-201ENSMUST00000184204 104 ntBASIC4.12□□□□□ -1.75
PrkdcP97313 Rnu3a-202ENSMUST00000196710 213 ntBASIC4.12□□□□□ -1.75
PrkdcP97313 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC4.12□□□□□ -1.75
PrkdcP97313 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC4.12□□□□□ -1.75
PrkdcP97313 Gm44219-201ENSMUST00000203005 273 ntBASIC4.12□□□□□ -1.75
PrkdcP97313 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC4.12□□□□□ -1.75
PrkdcP97313 AC129085.4-201ENSMUST00000224536 570 ntBASIC4.12□□□□□ -1.75
PrkdcP97313 Rnu3a-201ENSMUST00000083936 214 ntBASIC4.12□□□□□ -1.75
PrkdcP97313 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
PrkdcP97313 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PrkdcP97313 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PrkdcP97313 H6pd-202ENSMUST00000084117 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PrkdcP97313 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC4.12□□□□□ -1.75
PrkdcP97313 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
PrkdcP97313 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC4.12□□□□□ -1.75
PrkdcP97313 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PrkdcP97313 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PrkdcP97313 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PrkdcP97313 Taf1-202ENSMUST00000118878 7210 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
PrkdcP97313 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC4.12□□□□□ -1.75
PrkdcP97313 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
PrkdcP97313 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PrkdcP97313 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PrkdcP97313 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC4.12□□□□□ -1.75
PrkdcP97313 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PrkdcP97313 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PrkdcP97313 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms