Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Traf1P39428 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Traf1P39428 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC7.41□□□□□ -1.22
Traf1P39428 Gm13702-201ENSMUST00000118542 825 ntBASIC7.41□□□□□ -1.22
Traf1P39428 Gm11318-201ENSMUST00000118640 961 ntBASIC7.41□□□□□ -1.22
Traf1P39428 Gm14300-201ENSMUST00000120800 946 ntBASIC7.41□□□□□ -1.22
Traf1P39428 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Traf1P39428 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC7.41□□□□□ -1.22
Traf1P39428 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC7.41□□□□□ -1.22
Traf1P39428 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Traf1P39428 Gm18833-201ENSMUST00000173218 862 ntBASIC7.41□□□□□ -1.22
Traf1P39428 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Traf1P39428 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Traf1P39428 Gm17048-201ENSMUST00000179266 847 ntBASIC7.41□□□□□ -1.22
Traf1P39428 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Traf1P39428 Gm27602-201ENSMUST00000183861 111 ntBASIC7.41□□□□□ -1.22
Traf1P39428 Gm27853-201ENSMUST00000184176 250 ntBASIC7.41□□□□□ -1.22
Traf1P39428 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Traf1P39428 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Traf1P39428 Gm43098-201ENSMUST00000199989 1297 ntBASIC7.41□□□□□ -1.22
Traf1P39428 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC7.41□□□□□ -1.22
Traf1P39428 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC7.41□□□□□ -1.22
Traf1P39428 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC7.41□□□□□ -1.22
Traf1P39428 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC7.41□□□□□ -1.22
Traf1P39428 AC107757.1-201ENSMUST00000226780 357 ntBASIC7.41□□□□□ -1.22
Traf1P39428 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Traf1P39428 n-R5s58-201ENSMUST00000093682 119 ntBASIC7.41□□□□□ -1.22
Traf1P39428 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Traf1P39428 AC115760.1-201ENSMUST00000225160 1327 ntBASIC7.41□□□□□ -1.22
Traf1P39428 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Traf1P39428 AC152922.2-201ENSMUST00000213353 3879 ntBASIC7.41□□□□□ -1.22
Traf1P39428 AC154612.1-202ENSMUST00000224806 1725 ntBASIC7.41□□□□□ -1.22
Traf1P39428 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Traf1P39428 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Traf1P39428 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
Traf1P39428 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Traf1P39428 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Traf1P39428 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Traf1P39428 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.22
Traf1P39428 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Traf1P39428 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Traf1P39428 Gm12442-201ENSMUST00000118372 338 ntBASIC7.4□□□□□ -1.22
Traf1P39428 Gm16016-201ENSMUST00000120831 550 ntBASIC7.4□□□□□ -1.22
Traf1P39428 Gm14457-201ENSMUST00000148069 1161 ntBASIC7.4□□□□□ -1.22
Traf1P39428 Mir1960-201ENSMUST00000157488 78 ntBASIC7.4□□□□□ -1.22
Traf1P39428 Gm24239-201ENSMUST00000157791 255 ntBASIC7.4□□□□□ -1.22
Traf1P39428 Gm23207-201ENSMUST00000158665 102 ntBASIC7.4□□□□□ -1.22
Traf1P39428 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Traf1P39428 Gm29160-201ENSMUST00000190094 699 ntBASIC7.4□□□□□ -1.22
Traf1P39428 Gm3351-201ENSMUST00000193454 505 ntBASIC7.4□□□□□ -1.22
Traf1P39428 Gm3544-201ENSMUST00000196129 305 ntBASIC7.4□□□□□ -1.22
Traf1P39428 Gm44162-201ENSMUST00000203543 544 ntBASIC7.4□□□□□ -1.22
Traf1P39428 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC7.4□□□□□ -1.22
Traf1P39428 Gm18851-201ENSMUST00000210087 1058 ntBASIC7.4□□□□□ -1.22
Traf1P39428 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC7.4□□□□□ -1.22
Traf1P39428 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC7.4□□□□□ -1.22
Traf1P39428 AC140930.1-201ENSMUST00000221889 389 ntBASIC7.4□□□□□ -1.22
Traf1P39428 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC7.4□□□□□ -1.22
Traf1P39428 AC156559.2-201ENSMUST00000224403 384 ntBASIC7.4□□□□□ -1.22
Traf1P39428 AC117769.2-201ENSMUST00000224612 469 ntBASIC7.4□□□□□ -1.22
Traf1P39428 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC7.4□□□□□ -1.22
Traf1P39428 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
Traf1P39428 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Traf1P39428 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Traf1P39428 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Traf1P39428 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Traf1P39428 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.23
Traf1P39428 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Traf1P39428 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
Traf1P39428 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC7.4□□□□□ -1.23
Traf1P39428 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Traf1P39428 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Traf1P39428 AC116950.1-201ENSMUST00000226322 3250 ntBASIC7.39□□□□□ -1.23
Traf1P39428 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Traf1P39428 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Traf1P39428 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Traf1P39428 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC7.39□□□□□ -1.23
Traf1P39428 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Traf1P39428 Gm45520-201ENSMUST00000210109 2031 ntBASIC7.39□□□□□ -1.23
Traf1P39428 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC7.39□□□□□ -1.23
Traf1P39428 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Traf1P39428 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Traf1P39428 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC7.39□□□□□ -1.23
Traf1P39428 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Traf1P39428 Gm24709-201ENSMUST00000104123 132 ntBASIC7.39□□□□□ -1.23
Traf1P39428 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Traf1P39428 Gm22953-201ENSMUST00000116724 101 ntBASIC7.39□□□□□ -1.23
Traf1P39428 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
Traf1P39428 Gm11498-201ENSMUST00000120660 949 ntBASIC7.39□□□□□ -1.23
Traf1P39428 Gm4789-201ENSMUST00000121708 1216 ntBASIC7.39□□□□□ -1.23
Traf1P39428 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC7.39□□□□□ -1.23
Traf1P39428 Gm15275-201ENSMUST00000154752 347 ntBASIC7.39□□□□□ -1.23
Traf1P39428 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Traf1P39428 Gm26346-201ENSMUST00000157525 329 ntBASIC7.39□□□□□ -1.23
Traf1P39428 Gm22214-201ENSMUST00000157563 172 ntBASIC7.39□□□□□ -1.23
Traf1P39428 Gm23894-201ENSMUST00000158107 313 ntBASIC7.39□□□□□ -1.23
Traf1P39428 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Traf1P39428 Gm22690-201ENSMUST00000175054 110 ntBASIC7.39□□□□□ -1.23
Traf1P39428 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Traf1P39428 n-R5s209-201ENSMUST00000179494 119 ntBASIC7.39□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms