Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc180J3QNE4 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Ccdc180J3QNE4 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc180J3QNE4 Gm37186-201ENSMUST00000195629 2861 ntBASIC11.38□□□□□ -0.59
Ccdc180J3QNE4 AC151984.1-201ENSMUST00000218261 2976 ntBASIC11.38□□□□□ -0.59
Ccdc180J3QNE4 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ccdc180J3QNE4 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC11.38□□□□□ -0.59
Ccdc180J3QNE4 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Ccdc180J3QNE4 Greb1-212ENSMUST00000162112 8058 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Ccdc180J3QNE4 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc180J3QNE4 Gm38381-201ENSMUST00000193594 2275 ntBASIC11.37□□□□□ -0.59
Ccdc180J3QNE4 Gm14098-201ENSMUST00000119295 623 ntBASIC11.37□□□□□ -0.59
Ccdc180J3QNE4 Gm3605-201ENSMUST00000185858 440 ntBASIC11.37□□□□□ -0.59
Ccdc180J3QNE4 AC154767.2-201ENSMUST00000224584 414 ntBASIC11.37□□□□□ -0.59
Ccdc180J3QNE4 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc180J3QNE4 Gm28392-201ENSMUST00000077630 393 ntBASIC11.37□□□□□ -0.59
Ccdc180J3QNE4 Gm26163-201ENSMUST00000083792 178 ntBASIC11.37□□□□□ -0.59
Ccdc180J3QNE4 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc180J3QNE4 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc180J3QNE4 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc180J3QNE4 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc180J3QNE4 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC11.37□□□□□ -0.59
Ccdc180J3QNE4 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc180J3QNE4 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc180J3QNE4 Gm37238-201ENSMUST00000195552 2390 ntBASIC11.37□□□□□ -0.59
Ccdc180J3QNE4 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Ccdc180J3QNE4 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc180J3QNE4 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc180J3QNE4 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc180J3QNE4 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc180J3QNE4 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Ccdc180J3QNE4 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Ccdc180J3QNE4 Gm16423-201ENSMUST00000120078 947 ntBASIC11.36□□□□□ -0.59
Ccdc180J3QNE4 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC11.36□□□□□ -0.59
Ccdc180J3QNE4 Gm29650-201ENSMUST00000188485 742 ntBASIC11.36□□□□□ -0.59
Ccdc180J3QNE4 Gm20770-201ENSMUST00000193474 694 ntBASIC11.36□□□□□ -0.59
Ccdc180J3QNE4 Gm44219-201ENSMUST00000203005 273 ntBASIC11.36□□□□□ -0.59
Ccdc180J3QNE4 Gm44837-201ENSMUST00000206863 717 ntBASIC11.36□□□□□ -0.59
Ccdc180J3QNE4 AC112956.1-201ENSMUST00000213563 492 ntBASIC11.36□□□□□ -0.59
Ccdc180J3QNE4 Gm8613-201ENSMUST00000220383 1077 ntBASIC11.36□□□□□ -0.59
Ccdc180J3QNE4 AC159208.1-201ENSMUST00000221403 649 ntBASIC11.36□□□□□ -0.59
Ccdc180J3QNE4 AC165260.1-201ENSMUST00000224127 683 ntBASIC11.36□□□□□ -0.59
Ccdc180J3QNE4 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc180J3QNE4 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc180J3QNE4 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Ccdc180J3QNE4 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc180J3QNE4 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc180J3QNE4 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC11.36□□□□□ -0.59
Ccdc180J3QNE4 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc180J3QNE4 Gm8761-201ENSMUST00000121507 955 ntBASIC11.36□□□□□ -0.59
Ccdc180J3QNE4 Gm23553-201ENSMUST00000157817 295 ntBASIC11.36□□□□□ -0.59
Ccdc180J3QNE4 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC11.36□□□□□ -0.59
Ccdc180J3QNE4 Gm45750-201ENSMUST00000211966 354 ntBASIC11.36□□□□□ -0.59
Ccdc180J3QNE4 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc180J3QNE4 Mir331-201ENSMUST00000083673 96 ntBASIC11.36□□□□□ -0.59
Ccdc180J3QNE4 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC11.36□□□□□ -0.59
Ccdc180J3QNE4 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Ccdc180J3QNE4 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc180J3QNE4 Gm44046-201ENSMUST00000203145 2678 ntBASIC11.36□□□□□ -0.59
Ccdc180J3QNE4 Gm43769-201ENSMUST00000201871 4323 ntBASIC11.35□□□□□ -0.59
Ccdc180J3QNE4 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc180J3QNE4 Gm38156-201ENSMUST00000194601 2260 ntBASIC11.35□□□□□ -0.59
Ccdc180J3QNE4 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc180J3QNE4 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc180J3QNE4 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc180J3QNE4 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc180J3QNE4 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Ccdc180J3QNE4 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc180J3QNE4 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc180J3QNE4 Mir1970-201ENSMUST00000157839 104 ntBASIC11.35□□□□□ -0.59
Ccdc180J3QNE4 Gm2959-201ENSMUST00000169844 621 ntBASIC11.35□□□□□ -0.59
Ccdc180J3QNE4 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC11.35□□□□□ -0.59
Ccdc180J3QNE4 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC11.35□□□□□ -0.59
Ccdc180J3QNE4 Gm1972-201ENSMUST00000181606 964 ntBASIC11.35□□□□□ -0.59
Ccdc180J3QNE4 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC11.35□□□□□ -0.59
Ccdc180J3QNE4 Gm43054-201ENSMUST00000199495 884 ntBASIC11.35□□□□□ -0.59
Ccdc180J3QNE4 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC11.35□□□□□ -0.59
Ccdc180J3QNE4 Gm2614-201ENSMUST00000223227 403 ntBASIC11.35□□□□□ -0.59
Ccdc180J3QNE4 AC168056.2-201ENSMUST00000223591 269 ntBASIC11.35□□□□□ -0.59
Ccdc180J3QNE4 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc180J3QNE4 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Ccdc180J3QNE4 Gm23502-201ENSMUST00000083902 145 ntBASIC11.35□□□□□ -0.59
Ccdc180J3QNE4 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Ccdc180J3QNE4 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc180J3QNE4 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC11.35□□□□□ -0.59
Ccdc180J3QNE4 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc180J3QNE4 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Ccdc180J3QNE4 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc180J3QNE4 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc180J3QNE4 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc180J3QNE4 Gm45457-201ENSMUST00000209931 3089 ntBASIC11.34□□□□□ -0.59
Ccdc180J3QNE4 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc180J3QNE4 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc180J3QNE4 Gm3943-201ENSMUST00000118606 718 ntBASIC11.34□□□□□ -0.59
Ccdc180J3QNE4 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Ccdc180J3QNE4 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC11.34□□□□□ -0.59
Ccdc180J3QNE4 Gm28943-201ENSMUST00000186187 615 ntBASIC11.34□□□□□ -0.59
Ccdc180J3QNE4 Gm28736-201ENSMUST00000186257 615 ntBASIC11.34□□□□□ -0.59
Ccdc180J3QNE4 Gm29401-201ENSMUST00000186690 615 ntBASIC11.34□□□□□ -0.59
Ccdc180J3QNE4 Gm29178-204ENSMUST00000186784 615 ntBASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 109 ms