Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CtcflA2APF3 Gm38096-201ENSMUST00000193692 2389 ntBASIC5.71□□□□□ -1.5
CtcflA2APF3 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CtcflA2APF3 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CtcflA2APF3 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
CtcflA2APF3 AC151971.5-201ENSMUST00000214422 3254 ntBASIC5.71□□□□□ -1.5
CtcflA2APF3 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.71□□□□□ -1.5
CtcflA2APF3 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CtcflA2APF3 Gm22774-201ENSMUST00000102084 109 ntBASIC5.71□□□□□ -1.5
CtcflA2APF3 Gm26416-201ENSMUST00000104280 134 ntBASIC5.71□□□□□ -1.5
CtcflA2APF3 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CtcflA2APF3 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
CtcflA2APF3 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CtcflA2APF3 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC5.71□□□□□ -1.5
CtcflA2APF3 Gm13260-201ENSMUST00000117797 1264 ntBASIC5.71□□□□□ -1.5
CtcflA2APF3 Gm12937-201ENSMUST00000118333 448 ntBASIC5.71□□□□□ -1.5
CtcflA2APF3 Gm13207-201ENSMUST00000119862 773 ntBASIC5.71□□□□□ -1.5
CtcflA2APF3 Gm12229-201ENSMUST00000120487 468 ntBASIC5.71□□□□□ -1.5
CtcflA2APF3 Gm7599-201ENSMUST00000121453 796 ntBASIC5.71□□□□□ -1.5
CtcflA2APF3 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC5.71□□□□□ -1.5
CtcflA2APF3 Gm25969-201ENSMUST00000157166 132 ntBASIC5.71□□□□□ -1.5
CtcflA2APF3 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CtcflA2APF3 Gm17022-201ENSMUST00000166415 922 ntBASIC5.71□□□□□ -1.5
CtcflA2APF3 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CtcflA2APF3 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CtcflA2APF3 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CtcflA2APF3 Mir7685-201ENSMUST00000183555 62 ntBASIC5.71□□□□□ -1.5
CtcflA2APF3 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
CtcflA2APF3 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC5.71□□□□□ -1.5
CtcflA2APF3 Gm37103-201ENSMUST00000191830 115 ntBASIC5.71□□□□□ -1.5
CtcflA2APF3 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC5.71□□□□□ -1.5
CtcflA2APF3 Gm7270-201ENSMUST00000195818 1128 ntBASIC5.71□□□□□ -1.5
CtcflA2APF3 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC5.71□□□□□ -1.5
CtcflA2APF3 Gm7463-201ENSMUST00000201541 547 ntBASIC5.71□□□□□ -1.5
CtcflA2APF3 Gm2221-201ENSMUST00000209342 418 ntBASIC5.71□□□□□ -1.5
CtcflA2APF3 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CtcflA2APF3 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC5.71□□□□□ -1.5
CtcflA2APF3 Gm45725-201ENSMUST00000212962 337 ntBASIC5.71□□□□□ -1.5
CtcflA2APF3 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC5.71□□□□□ -1.5
CtcflA2APF3 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
CtcflA2APF3 Gm19007-201ENSMUST00000217746 874 ntBASIC5.71□□□□□ -1.5
CtcflA2APF3 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC5.71□□□□□ -1.5
CtcflA2APF3 AC154461.5-201ENSMUST00000225429 774 ntBASIC5.71□□□□□ -1.5
CtcflA2APF3 AC156016.2-201ENSMUST00000228200 525 ntBASIC5.71□□□□□ -1.5
CtcflA2APF3 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CtcflA2APF3 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CtcflA2APF3 Gm24451-201ENSMUST00000083353 133 ntBASIC5.71□□□□□ -1.5
CtcflA2APF3 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CtcflA2APF3 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CtcflA2APF3 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
CtcflA2APF3 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CtcflA2APF3 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CtcflA2APF3 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
CtcflA2APF3 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC5.71□□□□□ -1.5
CtcflA2APF3 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CtcflA2APF3 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CtcflA2APF3 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CtcflA2APF3 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CtcflA2APF3 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CtcflA2APF3 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CtcflA2APF3 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CtcflA2APF3 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CtcflA2APF3 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CtcflA2APF3 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CtcflA2APF3 Gm37356-201ENSMUST00000193362 1613 ntBASIC5.7□□□□□ -1.5
CtcflA2APF3 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CtcflA2APF3 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CtcflA2APF3 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CtcflA2APF3 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CtcflA2APF3 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CtcflA2APF3 CT025686.2-201ENSMUST00000227898 3315 ntBASIC5.7□□□□□ -1.5
CtcflA2APF3 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC5.7□□□□□ -1.5
CtcflA2APF3 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.7□□□□□ -1.5
CtcflA2APF3 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CtcflA2APF3 Gm26417-201ENSMUST00000104274 135 ntBASIC5.7□□□□□ -1.5
CtcflA2APF3 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CtcflA2APF3 Gm14606-201ENSMUST00000117078 1155 ntBASIC5.7□□□□□ -1.5
CtcflA2APF3 Gm11858-201ENSMUST00000117935 838 ntBASIC5.7□□□□□ -1.5
CtcflA2APF3 Gm12985-201ENSMUST00000118376 183 ntBASIC5.7□□□□□ -1.5
CtcflA2APF3 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC5.7□□□□□ -1.5
CtcflA2APF3 Gm16284-201ENSMUST00000140995 400 ntBASIC5.7□□□□□ -1.5
CtcflA2APF3 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC5.7□□□□□ -1.5
CtcflA2APF3 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CtcflA2APF3 Gm16138-201ENSMUST00000159341 821 ntBASIC5.7□□□□□ -1.5
CtcflA2APF3 Gm16113-201ENSMUST00000159629 372 ntBASIC5.7□□□□□ -1.5
CtcflA2APF3 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CtcflA2APF3 Gm3760-201ENSMUST00000167475 804 ntBASIC5.7□□□□□ -1.5
CtcflA2APF3 Gm25640-201ENSMUST00000175378 125 ntBASIC5.7□□□□□ -1.5
CtcflA2APF3 Gm18953-201ENSMUST00000175694 300 ntBASIC5.7□□□□□ -1.5
CtcflA2APF3 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CtcflA2APF3 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CtcflA2APF3 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CtcflA2APF3 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CtcflA2APF3 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CtcflA2APF3 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CtcflA2APF3 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CtcflA2APF3 Gm21392-201ENSMUST00000182950 972 ntBASIC5.7□□□□□ -1.5
CtcflA2APF3 Gm27152-201ENSMUST00000183828 99 ntBASIC5.7□□□□□ -1.5
CtcflA2APF3 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CtcflA2APF3 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms