Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 Gm6541-201ENSMUST00000165542 561 ntBASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 Mir7685-201ENSMUST00000183555 62 ntBASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 Gm27348-201ENSMUST00000184511 170 ntBASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 Gm37784-201ENSMUST00000193233 189 ntBASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 Ighv1-45-201ENSMUST00000193677 352 ntBASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 Gm3544-201ENSMUST00000196129 305 ntBASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 Gm43157-201ENSMUST00000198223 412 ntBASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 Gm43762-201ENSMUST00000201521 295 ntBASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 CT030645.3-201ENSMUST00000225483 1022 ntBASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 AC122290.1-201ENSMUST00000225631 1078 ntBASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 AC129537.1-201ENSMUST00000226596 1228 ntBASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 AC123629.1-201ENSMUST00000225669 1364 ntBASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 Gm10062-201ENSMUST00000072180 1470 ntBASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 Gm38096-201ENSMUST00000193692 2389 ntBASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 Gm37621-201ENSMUST00000194716 5531 ntBASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 Gm44697-201ENSMUST00000207756 1679 ntBASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Upk3aQ9JKX8 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
Upk3aQ9JKX8 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Upk3aQ9JKX8 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC6□□□□□ -1.45
Upk3aQ9JKX8 Gm37951-201ENSMUST00000192963 3032 ntBASIC6□□□□□ -1.45
Upk3aQ9JKX8 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
Upk3aQ9JKX8 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Upk3aQ9JKX8 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Upk3aQ9JKX8 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Upk3aQ9JKX8 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Upk3aQ9JKX8 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
Upk3aQ9JKX8 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Upk3aQ9JKX8 Snora35-201ENSMUST00000104579 128 ntBASIC6□□□□□ -1.45
Upk3aQ9JKX8 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC6□□□□□ -1.45
Upk3aQ9JKX8 Gm22714-201ENSMUST00000116894 78 ntBASIC6□□□□□ -1.45
Upk3aQ9JKX8 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC6□□□□□ -1.45
Upk3aQ9JKX8 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC6□□□□□ -1.45
Upk3aQ9JKX8 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC6□□□□□ -1.45
Upk3aQ9JKX8 Gm23553-201ENSMUST00000157817 295 ntBASIC6□□□□□ -1.45
Upk3aQ9JKX8 Gm6918-201ENSMUST00000167622 1222 ntBASIC6□□□□□ -1.45
Upk3aQ9JKX8 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC6□□□□□ -1.45
Upk3aQ9JKX8 Gm17198-201ENSMUST00000171792 1154 ntBASIC6□□□□□ -1.45
Upk3aQ9JKX8 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC6□□□□□ -1.45
Upk3aQ9JKX8 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC6□□□□□ -1.45
Upk3aQ9JKX8 Gm18006-201ENSMUST00000177411 662 ntBASIC6□□□□□ -1.45
Upk3aQ9JKX8 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Upk3aQ9JKX8 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC6□□□□□ -1.45
Upk3aQ9JKX8 Gm8367-201ENSMUST00000186145 887 ntBASIC6□□□□□ -1.45
Upk3aQ9JKX8 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC6□□□□□ -1.45
Upk3aQ9JKX8 Gm29234-201ENSMUST00000187452 1262 ntBASIC6□□□□□ -1.45
Upk3aQ9JKX8 Gm29464-201ENSMUST00000187692 513 ntBASIC6□□□□□ -1.45
Upk3aQ9JKX8 Gm29551-201ENSMUST00000190913 698 ntBASIC6□□□□□ -1.45
Upk3aQ9JKX8 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC6□□□□□ -1.45
Upk3aQ9JKX8 Gm37838-201ENSMUST00000194464 312 ntBASIC6□□□□□ -1.45
Upk3aQ9JKX8 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC6□□□□□ -1.45
Upk3aQ9JKX8 Gm32158-201ENSMUST00000200135 404 ntBASIC6□□□□□ -1.45
Upk3aQ9JKX8 Gm43233-201ENSMUST00000200491 616 ntBASIC6□□□□□ -1.45
Upk3aQ9JKX8 Gm44243-201ENSMUST00000204323 692 ntBASIC6□□□□□ -1.45
Upk3aQ9JKX8 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC6□□□□□ -1.45
Upk3aQ9JKX8 Gm4548-201ENSMUST00000208487 509 ntBASIC6□□□□□ -1.45
Upk3aQ9JKX8 AC151904.3-201ENSMUST00000219266 895 ntBASIC6□□□□□ -1.45
Upk3aQ9JKX8 AC154904.1-201ENSMUST00000219510 312 ntBASIC6□□□□□ -1.45
Upk3aQ9JKX8 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC6□□□□□ -1.45
Upk3aQ9JKX8 AC133203.1-201ENSMUST00000228241 301 ntBASIC6□□□□□ -1.45
Upk3aQ9JKX8 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC6□□□□□ -1.45
Upk3aQ9JKX8 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC6□□□□□ -1.45
Upk3aQ9JKX8 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC6□□□□□ -1.45
Upk3aQ9JKX8 Gm37100-201ENSMUST00000193344 1353 ntBASIC6□□□□□ -1.45
Upk3aQ9JKX8 AC116476.1-201ENSMUST00000226274 2318 ntBASIC6□□□□□ -1.45
Upk3aQ9JKX8 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Upk3aQ9JKX8 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC6□□□□□ -1.45
Upk3aQ9JKX8 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Upk3aQ9JKX8 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC6□□□□□ -1.45
Upk3aQ9JKX8 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Upk3aQ9JKX8 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Upk3aQ9JKX8 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Upk3aQ9JKX8 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC6□□□□□ -1.45
Upk3aQ9JKX8 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
Upk3aQ9JKX8 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Upk3aQ9JKX8 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms