Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Gm45259-201ENSMUST00000209217 1006 ntBASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Smc1aQ9CU62 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Gm38156-201ENSMUST00000194601 2260 ntBASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Smc1aQ9CU62 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Gm38366-201ENSMUST00000193127 1934 ntBASIC7.13□□□□□ -1.27
Smc1aQ9CU62 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Gm37541-201ENSMUST00000192464 2315 ntBASIC7.12□□□□□ -1.27
Smc1aQ9CU62 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Smc1aQ9CU62 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Smc1aQ9CU62 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Smc1aQ9CU62 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Smc1aQ9CU62 Gm13983-201ENSMUST00000118018 865 ntBASIC7.12□□□□□ -1.27
Smc1aQ9CU62 Gm15765-201ENSMUST00000118407 910 ntBASIC7.12□□□□□ -1.27
Smc1aQ9CU62 Gm13642-201ENSMUST00000121697 381 ntBASIC7.12□□□□□ -1.27
Smc1aQ9CU62 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC7.12□□□□□ -1.27
Smc1aQ9CU62 Gm25550-201ENSMUST00000158079 128 ntBASIC7.12□□□□□ -1.27
Smc1aQ9CU62 Gm23207-201ENSMUST00000158665 102 ntBASIC7.12□□□□□ -1.27
Smc1aQ9CU62 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Smc1aQ9CU62 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
Smc1aQ9CU62 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC7.12□□□□□ -1.27
Smc1aQ9CU62 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Smc1aQ9CU62 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC7.12□□□□□ -1.27
Smc1aQ9CU62 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC7.12□□□□□ -1.27
Smc1aQ9CU62 AC153557.1-201ENSMUST00000217697 403 ntBASIC7.12□□□□□ -1.27
Smc1aQ9CU62 Olfr809-203ENSMUST00000218237 1100 ntBASIC7.12□□□□□ -1.27
Smc1aQ9CU62 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC7.12□□□□□ -1.27
Smc1aQ9CU62 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Smc1aQ9CU62 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Smc1aQ9CU62 Olfr687-201ENSMUST00000098154 938 ntBASIC7.12□□□□□ -1.27
Smc1aQ9CU62 Gm43176-201ENSMUST00000199653 2989 ntBASIC7.12□□□□□ -1.27
Smc1aQ9CU62 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC7.12□□□□□ -1.27
Smc1aQ9CU62 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Smc1aQ9CU62 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Smc1aQ9CU62 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Smc1aQ9CU62 Gm38377-201ENSMUST00000193253 3772 ntBASIC7.12□□□□□ -1.27
Smc1aQ9CU62 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Smc1aQ9CU62 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC7.11□□□□□ -1.27
Smc1aQ9CU62 AC134577.3-201ENSMUST00000226490 3000 ntBASIC7.11□□□□□ -1.27
Smc1aQ9CU62 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Smc1aQ9CU62 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Smc1aQ9CU62 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC7.11□□□□□ -1.27
Smc1aQ9CU62 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC7.11□□□□□ -1.27
Smc1aQ9CU62 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Smc1aQ9CU62 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Smc1aQ9CU62 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Smc1aQ9CU62 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Smc1aQ9CU62 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC7.11□□□□□ -1.27
Smc1aQ9CU62 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Smc1aQ9CU62 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
Smc1aQ9CU62 AC139750.1-201ENSMUST00000223962 1300 ntBASIC7.11□□□□□ -1.27
Smc1aQ9CU62 AC121094.1-201ENSMUST00000224766 1345 ntBASIC7.11□□□□□ -1.27
Smc1aQ9CU62 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Smc1aQ9CU62 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC7.11□□□□□ -1.27
Smc1aQ9CU62 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Smc1aQ9CU62 Gm14733-201ENSMUST00000117680 133 ntBASIC7.11□□□□□ -1.27
Smc1aQ9CU62 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC7.11□□□□□ -1.27
Smc1aQ9CU62 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC7.11□□□□□ -1.27
Smc1aQ9CU62 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC7.11□□□□□ -1.27
Smc1aQ9CU62 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC7.11□□□□□ -1.27
Smc1aQ9CU62 Gm26509-201ENSMUST00000180947 948 ntBASIC7.11□□□□□ -1.27
Smc1aQ9CU62 Gm28885-201ENSMUST00000185615 563 ntBASIC7.11□□□□□ -1.27
Smc1aQ9CU62 Gm36448-201ENSMUST00000199916 438 ntBASIC7.11□□□□□ -1.27
Smc1aQ9CU62 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC7.11□□□□□ -1.27
Smc1aQ9CU62 AC134439.2-201ENSMUST00000221950 467 ntBASIC7.11□□□□□ -1.27
Smc1aQ9CU62 AC150661.1-201ENSMUST00000222563 495 ntBASIC7.11□□□□□ -1.27
Smc1aQ9CU62 AC158750.1-201ENSMUST00000226163 634 ntBASIC7.11□□□□□ -1.27
Smc1aQ9CU62 AC132833.4-201ENSMUST00000228313 203 ntBASIC7.11□□□□□ -1.27
Smc1aQ9CU62 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Smc1aQ9CU62 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Smc1aQ9CU62 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Smc1aQ9CU62 Gm45424-201ENSMUST00000210575 3300 ntBASIC7.11□□□□□ -1.27
Smc1aQ9CU62 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Smc1aQ9CU62 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC7.11□□□□□ -1.27
Smc1aQ9CU62 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Smc1aQ9CU62 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Smc1aQ9CU62 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
Smc1aQ9CU62 Gm42881-201ENSMUST00000198636 3344 ntBASIC7.11□□□□□ -1.27
Smc1aQ9CU62 Gm9839-201ENSMUST00000195252 1437 ntBASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Gm38178-201ENSMUST00000194502 2471 ntBASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Gm42727-201ENSMUST00000202446 2823 ntBASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Smc1aQ9CU62 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Smc1aQ9CU62 AU020206-202ENSMUST00000206358 3009 ntBASIC7.1□□□□□ -1.27
Smc1aQ9CU62 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Gm42676-201ENSMUST00000197609 2686 ntBASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Gm42892-201ENSMUST00000196227 3973 ntBASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms