Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Scrt1Q99M85 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Scrt1Q99M85 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Scrt1Q99M85 AC159308.1-201ENSMUST00000216615 1351 ntBASIC5.59□□□□□ -1.51
Scrt1Q99M85 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Scrt1Q99M85 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Scrt1Q99M85 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Scrt1Q99M85 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Scrt1Q99M85 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
Scrt1Q99M85 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Scrt1Q99M85 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Scrt1Q99M85 Gm12643-201ENSMUST00000116078 374 ntBASIC5.59□□□□□ -1.51
Scrt1Q99M85 Gm11984-201ENSMUST00000118142 766 ntBASIC5.59□□□□□ -1.51
Scrt1Q99M85 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Scrt1Q99M85 Gm23884-201ENSMUST00000122687 294 ntBASIC5.59□□□□□ -1.51
Scrt1Q99M85 Gm24179-201ENSMUST00000158925 127 ntBASIC5.59□□□□□ -1.51
Scrt1Q99M85 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC5.59□□□□□ -1.51
Scrt1Q99M85 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC5.59□□□□□ -1.51
Scrt1Q99M85 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Scrt1Q99M85 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC5.59□□□□□ -1.51
Scrt1Q99M85 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC5.59□□□□□ -1.51
Scrt1Q99M85 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC5.59□□□□□ -1.51
Scrt1Q99M85 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC5.59□□□□□ -1.51
Scrt1Q99M85 Gm28941-201ENSMUST00000185536 1017 ntBASIC5.59□□□□□ -1.51
Scrt1Q99M85 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Scrt1Q99M85 Gm18447-201ENSMUST00000187501 307 ntBASIC5.59□□□□□ -1.51
Scrt1Q99M85 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Scrt1Q99M85 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC5.59□□□□□ -1.51
Scrt1Q99M85 Mir6906-201ENSMUST00000198998 58 ntBASIC5.59□□□□□ -1.51
Scrt1Q99M85 Gm44984-201ENSMUST00000207802 394 ntBASIC5.59□□□□□ -1.51
Scrt1Q99M85 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Scrt1Q99M85 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC5.59□□□□□ -1.51
Scrt1Q99M85 Gm17950-201ENSMUST00000214617 646 ntBASIC5.59□□□□□ -1.51
Scrt1Q99M85 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC5.59□□□□□ -1.51
Scrt1Q99M85 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Scrt1Q99M85 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC5.59□□□□□ -1.51
Scrt1Q99M85 AC211878.6-201ENSMUST00000221896 358 ntBASIC5.59□□□□□ -1.51
Scrt1Q99M85 AC158525.1-201ENSMUST00000223806 576 ntBASIC5.59□□□□□ -1.51
Scrt1Q99M85 AC174797.2-203ENSMUST00000224017 716 ntBASIC5.59□□□□□ -1.51
Scrt1Q99M85 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Scrt1Q99M85 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Scrt1Q99M85 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Scrt1Q99M85 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Scrt1Q99M85 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC5.59□□□□□ -1.51
Scrt1Q99M85 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Scrt1Q99M85 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Scrt1Q99M85 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Scrt1Q99M85 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
Scrt1Q99M85 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Scrt1Q99M85 AC167013.5-201ENSMUST00000227597 2947 ntBASIC5.59□□□□□ -1.51
Scrt1Q99M85 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Scrt1Q99M85 Gm21122-201ENSMUST00000191548 3452 ntBASIC5.59□□□□□ -1.51
Scrt1Q99M85 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Scrt1Q99M85 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Scrt1Q99M85 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Scrt1Q99M85 Gm44039-201ENSMUST00000204192 2246 ntBASIC5.59□□□□□ -1.52
Scrt1Q99M85 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Scrt1Q99M85 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Scrt1Q99M85 Gm38082-201ENSMUST00000192800 6882 ntBASIC5.59□□□□□ -1.52
Scrt1Q99M85 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Scrt1Q99M85 Gm37518-201ENSMUST00000194930 2603 ntBASIC5.59□□□□□ -1.52
Scrt1Q99M85 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
Scrt1Q99M85 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
Scrt1Q99M85 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Scrt1Q99M85 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Scrt1Q99M85 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Scrt1Q99M85 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Scrt1Q99M85 Gm43488-201ENSMUST00000198874 2504 ntBASIC5.58□□□□□ -1.52
Scrt1Q99M85 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC5.58□□□□□ -1.52
Scrt1Q99M85 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Scrt1Q99M85 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Scrt1Q99M85 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Scrt1Q99M85 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC5.58□□□□□ -1.52
Scrt1Q99M85 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Scrt1Q99M85 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Scrt1Q99M85 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Scrt1Q99M85 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Scrt1Q99M85 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Scrt1Q99M85 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Scrt1Q99M85 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Scrt1Q99M85 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Scrt1Q99M85 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Scrt1Q99M85 Gm13469-201ENSMUST00000118231 350 ntBASIC5.58□□□□□ -1.52
Scrt1Q99M85 Gm15959-201ENSMUST00000121724 368 ntBASIC5.58□□□□□ -1.52
Scrt1Q99M85 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Scrt1Q99M85 Gm23891-201ENSMUST00000158114 138 ntBASIC5.58□□□□□ -1.52
Scrt1Q99M85 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC5.58□□□□□ -1.52
Scrt1Q99M85 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC5.58□□□□□ -1.52
Scrt1Q99M85 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC5.58□□□□□ -1.52
Scrt1Q99M85 Gm8009-201ENSMUST00000191672 436 ntBASIC5.58□□□□□ -1.52
Scrt1Q99M85 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Scrt1Q99M85 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Scrt1Q99M85 Gm43157-201ENSMUST00000198223 412 ntBASIC5.58□□□□□ -1.52
Scrt1Q99M85 BC049739-201ENSMUST00000202626 660 ntBASIC5.58□□□□□ -1.52
Scrt1Q99M85 Gm44265-201ENSMUST00000203631 465 ntBASIC5.58□□□□□ -1.52
Scrt1Q99M85 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC5.58□□□□□ -1.52
Scrt1Q99M85 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Scrt1Q99M85 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Scrt1Q99M85 AC140288.1-201ENSMUST00000226329 503 ntBASIC5.58□□□□□ -1.52
Scrt1Q99M85 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms