Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Lsm1Q8VC85 Gm44043-201ENSMUST00000203426 3253 ntBASIC6.04□□□□□ -1.44
Lsm1Q8VC85 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Lsm1Q8VC85 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC6.04□□□□□ -1.44
Lsm1Q8VC85 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC6.04□□□□□ -1.44
Lsm1Q8VC85 Gm12540-201ENSMUST00000121938 319 ntBASIC6.04□□□□□ -1.44
Lsm1Q8VC85 Gm15187-201ENSMUST00000122329 264 ntBASIC6.04□□□□□ -1.44
Lsm1Q8VC85 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC6.04□□□□□ -1.44
Lsm1Q8VC85 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC6.04□□□□□ -1.44
Lsm1Q8VC85 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC6.04□□□□□ -1.44
Lsm1Q8VC85 Gm3140-201ENSMUST00000163523 481 ntBASIC6.04□□□□□ -1.44
Lsm1Q8VC85 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Lsm1Q8VC85 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC6.04□□□□□ -1.44
Lsm1Q8VC85 Gm27005-201ENSMUST00000182783 921 ntBASIC6.04□□□□□ -1.44
Lsm1Q8VC85 Mir6908-201ENSMUST00000184056 63 ntBASIC6.04□□□□□ -1.44
Lsm1Q8VC85 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC6.04□□□□□ -1.44
Lsm1Q8VC85 Gm17824-201ENSMUST00000197690 805 ntBASIC6.04□□□□□ -1.44
Lsm1Q8VC85 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Lsm1Q8VC85 AC135353.1-201ENSMUST00000215330 630 ntBASIC6.04□□□□□ -1.44
Lsm1Q8VC85 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC6.04□□□□□ -1.44
Lsm1Q8VC85 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC6.04□□□□□ -1.44
Lsm1Q8VC85 CT030705.2-201ENSMUST00000225301 556 ntBASIC6.04□□□□□ -1.44
Lsm1Q8VC85 CT009711.2-201ENSMUST00000225352 934 ntBASIC6.04□□□□□ -1.44
Lsm1Q8VC85 AC123061.2-201ENSMUST00000226234 802 ntBASIC6.04□□□□□ -1.44
Lsm1Q8VC85 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Lsm1Q8VC85 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Lsm1Q8VC85 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC6.04□□□□□ -1.44
Lsm1Q8VC85 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Lsm1Q8VC85 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Lsm1Q8VC85 CT009757.5-201ENSMUST00000221858 3425 ntBASIC6.04□□□□□ -1.44
Lsm1Q8VC85 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Lsm1Q8VC85 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC6.04□□□□□ -1.44
Lsm1Q8VC85 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
Lsm1Q8VC85 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Lsm1Q8VC85 Gm44843-201ENSMUST00000208320 1396 ntBASIC6.04□□□□□ -1.44
Lsm1Q8VC85 AC140393.3-201ENSMUST00000228396 1352 ntBASIC6.04□□□□□ -1.44
Lsm1Q8VC85 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Lsm1Q8VC85 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Lsm1Q8VC85 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Lsm1Q8VC85 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Lsm1Q8VC85 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Lsm1Q8VC85 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Gm45201-201ENSMUST00000207187 2679 ntBASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Kcne3-203ENSMUST00000178946 1323 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 AC122769.3-201ENSMUST00000227739 3245 ntBASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Apc-ps1-201ENSMUST00000119356 470 ntBASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Gm5283-201ENSMUST00000177874 334 ntBASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Gm38068-201ENSMUST00000192546 540 ntBASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Gm38170-201ENSMUST00000195404 816 ntBASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Gm44582-201ENSMUST00000209125 445 ntBASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Gm7769-201ENSMUST00000212900 933 ntBASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Gm8290-201ENSMUST00000218202 477 ntBASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 AC154431.2-201ENSMUST00000225215 1055 ntBASIC6.03□□□□□ -1.44
Lsm1Q8VC85 AC131033.2-201ENSMUST00000228138 1011 ntBASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Gm23054-201ENSMUST00000082804 162 ntBASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Gm14896-201ENSMUST00000121311 1351 ntBASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Gm37127-201ENSMUST00000192924 3036 ntBASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Gm15425-201ENSMUST00000119013 2711 ntBASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Lsm1Q8VC85 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms