Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Vcpip1Q8CDG3 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Vcpip1Q8CDG3 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Vcpip1Q8CDG3 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
Vcpip1Q8CDG3 Gm37531-201ENSMUST00000191628 5415 ntBASIC6.82□□□□□ -1.32
Vcpip1Q8CDG3 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Vcpip1Q8CDG3 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Vcpip1Q8CDG3 Gm43088-201ENSMUST00000197530 2347 ntBASIC6.82□□□□□ -1.32
Vcpip1Q8CDG3 Gm43612-201ENSMUST00000196087 3207 ntBASIC6.82□□□□□ -1.32
Vcpip1Q8CDG3 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC6.82□□□□□ -1.32
Vcpip1Q8CDG3 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Vcpip1Q8CDG3 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Vcpip1Q8CDG3 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Gm13854-201ENSMUST00000121183 1679 ntBASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Gm37262-201ENSMUST00000192816 1818 ntBASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Gm14356-201ENSMUST00000118322 869 ntBASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Gm12244-201ENSMUST00000119500 291 ntBASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Gm11504-201ENSMUST00000120211 173 ntBASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Gm12540-201ENSMUST00000121938 319 ntBASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Gm8648-201ENSMUST00000122457 221 ntBASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Gm23968-201ENSMUST00000175047 125 ntBASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Gm9658-201ENSMUST00000182757 1012 ntBASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Gm27186-201ENSMUST00000184223 307 ntBASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Gm28586-201ENSMUST00000189857 456 ntBASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Gm29778-201ENSMUST00000201667 466 ntBASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Gm44253-201ENSMUST00000203387 628 ntBASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Gm44243-201ENSMUST00000204323 692 ntBASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 AC154642.1-201ENSMUST00000224173 740 ntBASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 AC122533.1-201ENSMUST00000225177 767 ntBASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Gm6990-201ENSMUST00000086830 348 ntBASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 AC121960.2-201ENSMUST00000227349 3446 ntBASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC6.81□□□□□ -1.32
Vcpip1Q8CDG3 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Vcpip1Q8CDG3 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC6.8□□□□□ -1.32
Vcpip1Q8CDG3 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC6.8□□□□□ -1.32
Vcpip1Q8CDG3 Gm14367-201ENSMUST00000119214 1497 ntBASIC6.8□□□□□ -1.32
Vcpip1Q8CDG3 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Vcpip1Q8CDG3 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Vcpip1Q8CDG3 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Vcpip1Q8CDG3 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Vcpip1Q8CDG3 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Vcpip1Q8CDG3 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Vcpip1Q8CDG3 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Vcpip1Q8CDG3 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Vcpip1Q8CDG3 AC139754.2-201ENSMUST00000218037 1455 ntBASIC6.8□□□□□ -1.32
Vcpip1Q8CDG3 Gm37951-201ENSMUST00000192963 3032 ntBASIC6.8□□□□□ -1.32
Vcpip1Q8CDG3 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Vcpip1Q8CDG3 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Vcpip1Q8CDG3 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Vcpip1Q8CDG3 Gm26340-201ENSMUST00000102365 99 ntBASIC6.8□□□□□ -1.32
Vcpip1Q8CDG3 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Vcpip1Q8CDG3 Gm24790-201ENSMUST00000104285 132 ntBASIC6.8□□□□□ -1.32
Vcpip1Q8CDG3 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Vcpip1Q8CDG3 Gm12842-201ENSMUST00000117298 476 ntBASIC6.8□□□□□ -1.32
Vcpip1Q8CDG3 Gm14733-201ENSMUST00000117680 133 ntBASIC6.8□□□□□ -1.32
Vcpip1Q8CDG3 Gm12849-201ENSMUST00000120013 739 ntBASIC6.8□□□□□ -1.32
Vcpip1Q8CDG3 Gm11925-201ENSMUST00000121375 535 ntBASIC6.8□□□□□ -1.32
Vcpip1Q8CDG3 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Vcpip1Q8CDG3 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Vcpip1Q8CDG3 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Vcpip1Q8CDG3 Gm25117-201ENSMUST00000157194 144 ntBASIC6.8□□□□□ -1.32
Vcpip1Q8CDG3 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Vcpip1Q8CDG3 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Vcpip1Q8CDG3 Gm25675-201ENSMUST00000174979 118 ntBASIC6.8□□□□□ -1.32
Vcpip1Q8CDG3 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
Vcpip1Q8CDG3 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms