Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Olfr449-204ENSMUST00000214687 1921 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Gm38085-201ENSMUST00000195785 3062 ntBASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 AW146154-201ENSMUST00000098509 3411 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Mir193b-201ENSMUST00000103784 79 ntBASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Gm25019-201ENSMUST00000179732 110 ntBASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Gm21728-201ENSMUST00000188442 695 ntBASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Gm21889-201ENSMUST00000188487 695 ntBASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Gm20932-201ENSMUST00000189115 694 ntBASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Gm21920-201ENSMUST00000190042 695 ntBASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Gm44919-201ENSMUST00000208587 1073 ntBASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 AC124826.1-201ENSMUST00000221651 325 ntBASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Gm9202-201ENSMUST00000223036 437 ntBASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 AC123665.6-201ENSMUST00000228568 538 ntBASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 AC154806.5-205ENSMUST00000228828 411 ntBASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Gm11242-201ENSMUST00000120103 2457 ntBASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col6a6Q8C6K9 Gm37663-201ENSMUST00000191887 2299 ntBASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 Gm38124-201ENSMUST00000191710 2581 ntBASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 Gm16423-201ENSMUST00000120078 947 ntBASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 Gm15331-201ENSMUST00000120225 385 ntBASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 Gm8506-201ENSMUST00000186661 829 ntBASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 Gm28665-201ENSMUST00000189269 670 ntBASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 Gm37477-201ENSMUST00000195215 884 ntBASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 Gm10095-201ENSMUST00000222765 483 ntBASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 AC159195.2-201ENSMUST00000223670 3757 ntBASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 Rbpj-201ENSMUST00000037618 5459 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 Gm18310-201ENSMUST00000206494 3912 ntBASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 Gm15766-201ENSMUST00000118025 813 ntBASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 Gm13998-201ENSMUST00000120952 335 ntBASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 Gm25152-201ENSMUST00000157117 114 ntBASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 Gm3650-201ENSMUST00000180600 747 ntBASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 Gm43148-201ENSMUST00000198237 520 ntBASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 Gm37953-201ENSMUST00000195293 1884 ntBASIC5.63□□□□□ -1.51
Col6a6Q8C6K9 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a6Q8C6K9 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Col6a6Q8C6K9 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Col6a6Q8C6K9 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col6a6Q8C6K9 Gm22592-201ENSMUST00000104242 131 ntBASIC5.62□□□□□ -1.51
Col6a6Q8C6K9 Gm14173-201ENSMUST00000117690 278 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms