Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Rif1Q6PR54 Gm12110-201ENSMUST00000121601 579 ntBASIC5.45□□□□□ -1.54
Rif1Q6PR54 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Rif1Q6PR54 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Rif1Q6PR54 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Rif1Q6PR54 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC5.45□□□□□ -1.54
Rif1Q6PR54 Gm37322-201ENSMUST00000193409 337 ntBASIC5.45□□□□□ -1.54
Rif1Q6PR54 Gm37681-201ENSMUST00000193880 727 ntBASIC5.45□□□□□ -1.54
Rif1Q6PR54 Gm42544-201ENSMUST00000197868 3242 ntBASIC5.45□□□□□ -1.54
Rif1Q6PR54 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Rif1Q6PR54 Gm8863-201ENSMUST00000216630 926 ntBASIC5.45□□□□□ -1.54
Rif1Q6PR54 Gm20368-201ENSMUST00000220716 301 ntBASIC5.45□□□□□ -1.54
Rif1Q6PR54 AC154861.1-201ENSMUST00000223767 800 ntBASIC5.45□□□□□ -1.54
Rif1Q6PR54 AC132833.4-201ENSMUST00000228313 203 ntBASIC5.45□□□□□ -1.54
Rif1Q6PR54 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC5.45□□□□□ -1.54
Rif1Q6PR54 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Rif1Q6PR54 Gm25587-201ENSMUST00000082498 166 ntBASIC5.45□□□□□ -1.54
Rif1Q6PR54 Gm43970-201ENSMUST00000204346 3605 ntBASIC5.45□□□□□ -1.54
Rif1Q6PR54 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Rif1Q6PR54 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Rif1Q6PR54 Gm37520-201ENSMUST00000194883 2672 ntBASIC5.45□□□□□ -1.54
Rif1Q6PR54 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Rif1Q6PR54 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Rif1Q6PR54 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Rif1Q6PR54 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Rif1Q6PR54 Virma-201ENSMUST00000055372 3954 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Rif1Q6PR54 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.45□□□□□ -1.54
Rif1Q6PR54 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC5.45□□□□□ -1.54
Rif1Q6PR54 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC5.45□□□□□ -1.54
Rif1Q6PR54 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC5.45□□□□□ -1.54
Rif1Q6PR54 Gm17101-201ENSMUST00000169520 1588 ntBASIC5.45□□□□□ -1.54
Rif1Q6PR54 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
Rif1Q6PR54 Gm6620-201ENSMUST00000120113 715 ntBASIC5.45□□□□□ -1.54
Rif1Q6PR54 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Rif1Q6PR54 Gm7426-201ENSMUST00000179046 404 ntBASIC5.45□□□□□ -1.54
Rif1Q6PR54 Gm38254-201ENSMUST00000192276 1009 ntBASIC5.45□□□□□ -1.54
Rif1Q6PR54 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC5.45□□□□□ -1.54
Rif1Q6PR54 AC121997.2-202ENSMUST00000227158 939 ntBASIC5.45□□□□□ -1.54
Rif1Q6PR54 Gm12695-201ENSMUST00000107071 1904 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Rif1Q6PR54 Tbc1d15-201ENSMUST00000020339 3752 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Rif1Q6PR54 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Rif1Q6PR54 Gm19125-201ENSMUST00000188408 1383 ntBASIC5.45□□□□□ -1.54
Rif1Q6PR54 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Rif1Q6PR54 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.45□□□□□ -1.54
Rif1Q6PR54 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Rif1Q6PR54 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Rif1Q6PR54 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Rif1Q6PR54 Zfp592-201ENSMUST00000107353 7297 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Rif1Q6PR54 Gm11878-201ENSMUST00000117908 400 ntBASIC5.44□□□□□ -1.54
Rif1Q6PR54 Gm24628-201ENSMUST00000122761 289 ntBASIC5.44□□□□□ -1.54
Rif1Q6PR54 Gm23513-201ENSMUST00000158181 133 ntBASIC5.44□□□□□ -1.54
Rif1Q6PR54 Sla-202ENSMUST00000164163 2952 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
Rif1Q6PR54 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Rif1Q6PR54 Mir5125-201ENSMUST00000175240 79 ntBASIC5.44□□□□□ -1.54
Rif1Q6PR54 Gm22932-201ENSMUST00000175510 72 ntBASIC5.44□□□□□ -1.54
Rif1Q6PR54 Gm21816-201ENSMUST00000179255 360 ntBASIC5.44□□□□□ -1.54
Rif1Q6PR54 Gm43768-201ENSMUST00000198380 1258 ntBASIC5.44□□□□□ -1.54
Rif1Q6PR54 Gm9535-201ENSMUST00000218499 768 ntBASIC5.44□□□□□ -1.54
Rif1Q6PR54 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC5.44□□□□□ -1.54
Rif1Q6PR54 Gm4263-201ENSMUST00000220693 1101 ntBASIC5.44□□□□□ -1.54
Rif1Q6PR54 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC5.44□□□□□ -1.54
Rif1Q6PR54 Gm36262-201ENSMUST00000223274 499 ntBASIC5.44□□□□□ -1.54
Rif1Q6PR54 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Rif1Q6PR54 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Rif1Q6PR54 Celf2-223ENSMUST00000182851 3587 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Rif1Q6PR54 AC156645.1-201ENSMUST00000223066 5194 ntBASIC5.44□□□□□ -1.54
Rif1Q6PR54 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
Rif1Q6PR54 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Rif1Q6PR54 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Rif1Q6PR54 Hdlbp-202ENSMUST00000170883 6231 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Rif1Q6PR54 Gm38300-201ENSMUST00000194245 1870 ntBASIC5.44□□□□□ -1.54
Rif1Q6PR54 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Rif1Q6PR54 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Rif1Q6PR54 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC5.44□□□□□ -1.54
Rif1Q6PR54 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Rif1Q6PR54 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
Rif1Q6PR54 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Rif1Q6PR54 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Rif1Q6PR54 Gm26310-201ENSMUST00000157766 117 ntBASIC5.44□□□□□ -1.54
Rif1Q6PR54 Gm28140-201ENSMUST00000190148 1271 ntTSL 5 BASIC5.44□□□□□ -1.54
Rif1Q6PR54 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC5.44□□□□□ -1.54
Rif1Q6PR54 Gm19060-201ENSMUST00000201959 421 ntBASIC5.44□□□□□ -1.54
Rif1Q6PR54 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC5.44□□□□□ -1.54
Rif1Q6PR54 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC5.44□□□□□ -1.54
Rif1Q6PR54 Gm9321-201ENSMUST00000221179 778 ntBASIC5.44□□□□□ -1.54
Rif1Q6PR54 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC5.44□□□□□ -1.54
Rif1Q6PR54 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC5.44□□□□□ -1.54
Rif1Q6PR54 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Rif1Q6PR54 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Rif1Q6PR54 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Rif1Q6PR54 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Rif1Q6PR54 Mir331-201ENSMUST00000083673 96 ntBASIC5.44□□□□□ -1.54
Rif1Q6PR54 Rbpj-201ENSMUST00000037618 5459 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Rif1Q6PR54 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Rif1Q6PR54 Gm44553-201ENSMUST00000206316 2037 ntBASIC5.44□□□□□ -1.54
Rif1Q6PR54 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC5.44□□□□□ -1.54
Rif1Q6PR54 Gm43164-201ENSMUST00000202529 2128 ntBASIC5.44□□□□□ -1.54
Rif1Q6PR54 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC5.44□□□□□ -1.54
Rif1Q6PR54 Retreg1-203ENSMUST00000226438 2783 ntBASIC5.44□□□□□ -1.54
Rif1Q6PR54 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms