Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Gm37913-201ENSMUST00000192925 2544 ntBASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 AC153143.2-201ENSMUST00000220999 1804 ntBASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Gm31049-201ENSMUST00000201516 1302 ntBASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Gm17170-201ENSMUST00000112785 316 ntBASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Gm4596-201ENSMUST00000117197 442 ntBASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Gm13400-201ENSMUST00000117436 380 ntBASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Gm15176-201ENSMUST00000117734 135 ntBASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Gm14741-201ENSMUST00000120777 1009 ntBASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Gm11404-201ENSMUST00000120872 494 ntBASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Gm25722-201ENSMUST00000157498 279 ntBASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Gm24286-201ENSMUST00000157632 128 ntBASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Gm24738-201ENSMUST00000158856 123 ntBASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Gm3102-201ENSMUST00000164236 489 ntBASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Gm17064-201ENSMUST00000167690 452 ntBASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Mir8094-201ENSMUST00000183361 117 ntBASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 1700020D05Rik-201ENSMUST00000189704 1021 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Gm21577-201ENSMUST00000190823 697 ntBASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Trbv28-201ENSMUST00000192804 264 ntBASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Gm37260-201ENSMUST00000193748 1251 ntBASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Gm24826-202ENSMUST00000197298 216 ntBASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Gm42502-201ENSMUST00000198550 1089 ntBASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Gm43431-201ENSMUST00000198577 340 ntBASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Gm4859-201ENSMUST00000199625 787 ntBASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Hba-x-201ENSMUST00000020531 801 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Gm44565-201ENSMUST00000208194 269 ntBASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Gm20948-201ENSMUST00000211091 449 ntBASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 AC153957.1-201ENSMUST00000215235 229 ntBASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 AC151971.2-201ENSMUST00000217540 909 ntBASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Gm5948-201ENSMUST00000219627 839 ntBASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 AC162467.1-201ENSMUST00000220254 621 ntBASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 AC163621.1-201ENSMUST00000220695 379 ntBASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 AC139941.1-201ENSMUST00000221517 478 ntBASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Gm5374-202ENSMUST00000222910 314 ntBASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 AC164436.1-201ENSMUST00000227074 772 ntBASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 CT030662.1-201ENSMUST00000227380 232 ntBASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 AC107453.2-201ENSMUST00000227714 655 ntBASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Gm9837-201ENSMUST00000057722 731 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Gm45516-201ENSMUST00000211588 4182 ntBASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC6.75□□□□□ -1.33
Scaf4Q6PFF0 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Scaf4Q6PFF0 CT010577.1-202ENSMUST00000226187 1903 ntBASIC6.74□□□□□ -1.33
Scaf4Q6PFF0 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Scaf4Q6PFF0 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC6.74□□□□□ -1.33
Scaf4Q6PFF0 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Scaf4Q6PFF0 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Scaf4Q6PFF0 Mir708-201ENSMUST00000102189 109 ntBASIC6.74□□□□□ -1.33
Scaf4Q6PFF0 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC6.74□□□□□ -1.33
Scaf4Q6PFF0 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Scaf4Q6PFF0 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Scaf4Q6PFF0 Gm13196-201ENSMUST00000118297 379 ntBASIC6.74□□□□□ -1.33
Scaf4Q6PFF0 Gm2318-201ENSMUST00000119623 639 ntBASIC6.74□□□□□ -1.33
Scaf4Q6PFF0 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Scaf4Q6PFF0 Gm22311-201ENSMUST00000158006 110 ntBASIC6.74□□□□□ -1.33
Scaf4Q6PFF0 Gm25770-201ENSMUST00000158566 115 ntBASIC6.74□□□□□ -1.33
Scaf4Q6PFF0 Gm23822-201ENSMUST00000158739 128 ntBASIC6.74□□□□□ -1.33
Scaf4Q6PFF0 Atp2b4-208ENSMUST00000167348 243 ntBASIC6.74□□□□□ -1.33
Scaf4Q6PFF0 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Scaf4Q6PFF0 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC6.74□□□□□ -1.33
Scaf4Q6PFF0 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC6.74□□□□□ -1.33
Scaf4Q6PFF0 Gm7438-201ENSMUST00000177664 639 ntBASIC6.74□□□□□ -1.33
Scaf4Q6PFF0 Gm20797-201ENSMUST00000177894 383 ntBASIC6.74□□□□□ -1.33
Scaf4Q6PFF0 Gm7408-201ENSMUST00000178014 639 ntBASIC6.74□□□□□ -1.33
Scaf4Q6PFF0 Gm7386-201ENSMUST00000178020 639 ntBASIC6.74□□□□□ -1.33
Scaf4Q6PFF0 Gm3657-201ENSMUST00000178170 639 ntBASIC6.74□□□□□ -1.33
Scaf4Q6PFF0 Gm7415-201ENSMUST00000178205 639 ntBASIC6.74□□□□□ -1.33
Scaf4Q6PFF0 Gm7398-201ENSMUST00000178589 639 ntBASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms