Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Ctdnep1Q3TP92 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ctdnep1Q3TP92 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC7.1□□□□□ -1.27
Ctdnep1Q3TP92 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Ctdnep1Q3TP92 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ctdnep1Q3TP92 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ctdnep1Q3TP92 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Ctdnep1Q3TP92 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Ctdnep1Q3TP92 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Ctdnep1Q3TP92 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC7.09□□□□□ -1.27
Ctdnep1Q3TP92 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Ctdnep1Q3TP92 AC124581.3-201ENSMUST00000224270 1624 ntBASIC7.09□□□□□ -1.27
Ctdnep1Q3TP92 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC7.09□□□□□ -1.27
Ctdnep1Q3TP92 Gm38070-201ENSMUST00000191850 6480 ntBASIC7.09□□□□□ -1.27
Ctdnep1Q3TP92 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Ctdnep1Q3TP92 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Ctdnep1Q3TP92 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Ctdnep1Q3TP92 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Ctdnep1Q3TP92 Gm25564-201ENSMUST00000104604 132 ntBASIC7.09□□□□□ -1.27
Ctdnep1Q3TP92 Gm14515-201ENSMUST00000121327 216 ntBASIC7.09□□□□□ -1.27
Ctdnep1Q3TP92 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC7.09□□□□□ -1.27
Ctdnep1Q3TP92 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC7.09□□□□□ -1.27
Ctdnep1Q3TP92 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Ctdnep1Q3TP92 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Ctdnep1Q3TP92 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Ctdnep1Q3TP92 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC7.09□□□□□ -1.27
Ctdnep1Q3TP92 Gm37809-201ENSMUST00000195050 931 ntBASIC7.09□□□□□ -1.27
Ctdnep1Q3TP92 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC7.09□□□□□ -1.27
Ctdnep1Q3TP92 Gm43048-201ENSMUST00000196101 388 ntBASIC7.09□□□□□ -1.27
Ctdnep1Q3TP92 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Ctdnep1Q3TP92 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC7.09□□□□□ -1.27
Ctdnep1Q3TP92 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC7.09□□□□□ -1.27
Ctdnep1Q3TP92 Gm44892-201ENSMUST00000208595 488 ntBASIC7.09□□□□□ -1.27
Ctdnep1Q3TP92 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Ctdnep1Q3TP92 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC7.09□□□□□ -1.27
Ctdnep1Q3TP92 AC118250.1-201ENSMUST00000228569 875 ntBASIC7.09□□□□□ -1.27
Ctdnep1Q3TP92 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Ctdnep1Q3TP92 Ankrd55-205ENSMUST00000223871 3209 ntBASIC7.09□□□□□ -1.27
Ctdnep1Q3TP92 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Ctdnep1Q3TP92 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ctdnep1Q3TP92 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ctdnep1Q3TP92 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Ctdnep1Q3TP92 Gm45838-201ENSMUST00000207355 2447 ntBASIC7.09□□□□□ -1.27
Ctdnep1Q3TP92 Gm43328-201ENSMUST00000198544 1434 ntBASIC7.09□□□□□ -1.28
Ctdnep1Q3TP92 Gm43961-201ENSMUST00000203289 1872 ntBASIC7.09□□□□□ -1.28
Ctdnep1Q3TP92 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.28
Ctdnep1Q3TP92 Gm44843-201ENSMUST00000208320 1396 ntBASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 AC123629.1-201ENSMUST00000225669 1364 ntBASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Gm45413-201ENSMUST00000210389 3538 ntBASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 n-R5s178-201ENSMUST00000104249 114 ntBASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Gm22714-201ENSMUST00000116894 78 ntBASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Gm12400-201ENSMUST00000120915 1003 ntBASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Gm8722-201ENSMUST00000121466 769 ntBASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Gm4152-201ENSMUST00000172675 259 ntBASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Gm29111-201ENSMUST00000188823 696 ntBASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Gm28584-201ENSMUST00000191489 696 ntBASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Gm38138-201ENSMUST00000193274 696 ntBASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Gm38237-201ENSMUST00000193366 376 ntBASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Gm37991-201ENSMUST00000194297 696 ntBASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Gm7492-201ENSMUST00000201745 725 ntBASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Gm18839-201ENSMUST00000204292 670 ntBASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Gm18405-201ENSMUST00000220743 511 ntBASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 AC174082.2-201ENSMUST00000222094 543 ntBASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 CT030238.4-202ENSMUST00000226143 745 ntBASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ctdnep1Q3TP92 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC7.08□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms