Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Sox9Q04887 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Sox9Q04887 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC7.05□□□□□ -1.28
Sox9Q04887 Gm13983-201ENSMUST00000118018 865 ntBASIC7.05□□□□□ -1.28
Sox9Q04887 Gm11504-201ENSMUST00000120211 173 ntBASIC7.05□□□□□ -1.28
Sox9Q04887 Gm16179-201ENSMUST00000120685 373 ntBASIC7.05□□□□□ -1.28
Sox9Q04887 Gm11278-201ENSMUST00000121002 997 ntBASIC7.05□□□□□ -1.28
Sox9Q04887 Gm15959-201ENSMUST00000121724 368 ntBASIC7.05□□□□□ -1.28
Sox9Q04887 Gm15529-201ENSMUST00000121833 994 ntBASIC7.05□□□□□ -1.28
Sox9Q04887 Mir1932-201ENSMUST00000157390 90 ntBASIC7.05□□□□□ -1.28
Sox9Q04887 Mir1960-201ENSMUST00000157488 78 ntBASIC7.05□□□□□ -1.28
Sox9Q04887 Gm26371-201ENSMUST00000157829 104 ntBASIC7.05□□□□□ -1.28
Sox9Q04887 Gm22210-201ENSMUST00000158101 144 ntBASIC7.05□□□□□ -1.28
Sox9Q04887 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Sox9Q04887 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC7.05□□□□□ -1.28
Sox9Q04887 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC7.05□□□□□ -1.28
Sox9Q04887 Gm44395-201ENSMUST00000197056 153 ntBASIC7.05□□□□□ -1.28
Sox9Q04887 Mir703-201ENSMUST00000197105 109 ntBASIC7.05□□□□□ -1.28
Sox9Q04887 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Sox9Q04887 Gm43725-201ENSMUST00000200122 369 ntBASIC7.05□□□□□ -1.28
Sox9Q04887 Gm43596-201ENSMUST00000202818 884 ntBASIC7.05□□□□□ -1.28
Sox9Q04887 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC7.05□□□□□ -1.28
Sox9Q04887 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC7.05□□□□□ -1.28
Sox9Q04887 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC7.05□□□□□ -1.28
Sox9Q04887 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC7.05□□□□□ -1.28
Sox9Q04887 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC7.05□□□□□ -1.28
Sox9Q04887 AC119894.1-201ENSMUST00000220399 350 ntBASIC7.05□□□□□ -1.28
Sox9Q04887 AC166358.9-201ENSMUST00000220653 375 ntBASIC7.05□□□□□ -1.28
Sox9Q04887 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC7.05□□□□□ -1.28
Sox9Q04887 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC7.05□□□□□ -1.28
Sox9Q04887 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC7.05□□□□□ -1.28
Sox9Q04887 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Sox9Q04887 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Sox9Q04887 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Sox9Q04887 Snora44-201ENSMUST00000082670 129 ntBASIC7.05□□□□□ -1.28
Sox9Q04887 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Sox9Q04887 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Sox9Q04887 Gm43845-201ENSMUST00000202462 1820 ntBASIC7.05□□□□□ -1.28
Sox9Q04887 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
Sox9Q04887 CT009734.1-201ENSMUST00000227657 1687 ntBASIC7.05□□□□□ -1.28
Sox9Q04887 AC156636.1-201ENSMUST00000218639 2229 ntBASIC7.05□□□□□ -1.28
Sox9Q04887 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Sox9Q04887 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Sox9Q04887 Gm42520-201ENSMUST00000199642 1502 ntBASIC7.05□□□□□ -1.28
Sox9Q04887 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Sox9Q04887 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC7.05□□□□□ -1.28
Sox9Q04887 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Sox9Q04887 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Sox9Q04887 Gm14762-201ENSMUST00000105109 1771 ntBASIC7.05□□□□□ -1.28
Sox9Q04887 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Sox9Q04887 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Sox9Q04887 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Sox9Q04887 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC7.04□□□□□ -1.28
Sox9Q04887 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox9Q04887 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox9Q04887 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Sox9Q04887 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox9Q04887 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox9Q04887 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC7.04□□□□□ -1.28
Sox9Q04887 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox9Q04887 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox9Q04887 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Sox9Q04887 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox9Q04887 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox9Q04887 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox9Q04887 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox9Q04887 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC7.04□□□□□ -1.28
Sox9Q04887 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox9Q04887 Gm11877-201ENSMUST00000118921 852 ntBASIC7.04□□□□□ -1.28
Sox9Q04887 Gm12565-201ENSMUST00000119004 649 ntBASIC7.04□□□□□ -1.28
Sox9Q04887 Gm7058-201ENSMUST00000119209 902 ntBASIC7.04□□□□□ -1.28
Sox9Q04887 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox9Q04887 Gm14380-201ENSMUST00000122298 431 ntBASIC7.04□□□□□ -1.28
Sox9Q04887 Gm22024-201ENSMUST00000122733 287 ntBASIC7.04□□□□□ -1.28
Sox9Q04887 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC7.04□□□□□ -1.28
Sox9Q04887 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC7.04□□□□□ -1.28
Sox9Q04887 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Sox9Q04887 Gm22818-201ENSMUST00000157446 104 ntBASIC7.04□□□□□ -1.28
Sox9Q04887 Gm22817-201ENSMUST00000157448 356 ntBASIC7.04□□□□□ -1.28
Sox9Q04887 Gm26487-201ENSMUST00000158022 94 ntBASIC7.04□□□□□ -1.28
Sox9Q04887 Gm23819-201ENSMUST00000158744 109 ntBASIC7.04□□□□□ -1.28
Sox9Q04887 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC7.04□□□□□ -1.28
Sox9Q04887 Gm17149-201ENSMUST00000164712 375 ntBASIC7.04□□□□□ -1.28
Sox9Q04887 Gm23799-201ENSMUST00000175559 120 ntBASIC7.04□□□□□ -1.28
Sox9Q04887 Mir3090-201ENSMUST00000175597 87 ntBASIC7.04□□□□□ -1.28
Sox9Q04887 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Sox9Q04887 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC7.04□□□□□ -1.28
Sox9Q04887 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Sox9Q04887 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC7.04□□□□□ -1.28
Sox9Q04887 Gm18849-201ENSMUST00000189861 560 ntBASIC7.04□□□□□ -1.28
Sox9Q04887 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC7.04□□□□□ -1.28
Sox9Q04887 Gm20915-201ENSMUST00000191575 663 ntBASIC7.04□□□□□ -1.28
Sox9Q04887 Gm44312-201ENSMUST00000203536 469 ntBASIC7.04□□□□□ -1.28
Sox9Q04887 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Sox9Q04887 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC7.04□□□□□ -1.28
Sox9Q04887 Gm18996-201ENSMUST00000214851 755 ntBASIC7.04□□□□□ -1.28
Sox9Q04887 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC7.04□□□□□ -1.28
Sox9Q04887 AC121997.2-202ENSMUST00000227158 939 ntBASIC7.04□□□□□ -1.28
Sox9Q04887 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Sox9Q04887 Gm24695-201ENSMUST00000083877 83 ntBASIC7.04□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms