Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 AC154406.1-201ENSMUST00000215220 2529 ntBASIC6.9□□□□□ -1.3
CiitaP79621 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC6.9□□□□□ -1.3
CiitaP79621 Gm38142-201ENSMUST00000194093 3555 ntBASIC6.9□□□□□ -1.3
CiitaP79621 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
CiitaP79621 Gm22374-201ENSMUST00000104583 132 ntBASIC6.9□□□□□ -1.3
CiitaP79621 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CiitaP79621 Gm13835-201ENSMUST00000118459 685 ntBASIC6.9□□□□□ -1.3
CiitaP79621 Gm12189-201ENSMUST00000119779 912 ntBASIC6.9□□□□□ -1.3
CiitaP79621 Gm23430-201ENSMUST00000122490 314 ntBASIC6.9□□□□□ -1.3
CiitaP79621 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CiitaP79621 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CiitaP79621 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC6.9□□□□□ -1.3
CiitaP79621 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CiitaP79621 Gm25387-201ENSMUST00000157813 132 ntBASIC6.9□□□□□ -1.3
CiitaP79621 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC6.9□□□□□ -1.3
CiitaP79621 Gm27512-201ENSMUST00000175328 126 ntBASIC6.9□□□□□ -1.3
CiitaP79621 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC6.9□□□□□ -1.3
CiitaP79621 Mir7082-201ENSMUST00000183526 92 ntBASIC6.9□□□□□ -1.3
CiitaP79621 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
CiitaP79621 Gm8860-201ENSMUST00000193160 445 ntBASIC6.9□□□□□ -1.3
CiitaP79621 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC6.9□□□□□ -1.3
CiitaP79621 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
CiitaP79621 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC6.9□□□□□ -1.3
CiitaP79621 Gm44075-201ENSMUST00000204208 216 ntBASIC6.9□□□□□ -1.3
CiitaP79621 Gm45196-201ENSMUST00000206751 825 ntBASIC6.9□□□□□ -1.3
CiitaP79621 Gm5418-201ENSMUST00000206932 528 ntBASIC6.9□□□□□ -1.3
CiitaP79621 Gm44809-201ENSMUST00000208305 993 ntBASIC6.9□□□□□ -1.3
CiitaP79621 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC6.9□□□□□ -1.3
CiitaP79621 AC122459.2-201ENSMUST00000227099 638 ntBASIC6.9□□□□□ -1.3
CiitaP79621 Gm6990-201ENSMUST00000086830 348 ntBASIC6.9□□□□□ -1.3
CiitaP79621 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CiitaP79621 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CiitaP79621 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CiitaP79621 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CiitaP79621 AC122024.1-201ENSMUST00000219276 4850 ntBASIC6.9□□□□□ -1.31
CiitaP79621 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CiitaP79621 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CiitaP79621 AC129085.2-201ENSMUST00000223763 2800 ntBASIC6.9□□□□□ -1.31
CiitaP79621 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC6.9□□□□□ -1.31
CiitaP79621 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CiitaP79621 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CiitaP79621 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CiitaP79621 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CiitaP79621 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CiitaP79621 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CiitaP79621 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
CiitaP79621 Gm44215-201ENSMUST00000204910 2711 ntBASIC6.89□□□□□ -1.31
CiitaP79621 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CiitaP79621 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CiitaP79621 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
CiitaP79621 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CiitaP79621 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CiitaP79621 Gm5809-201ENSMUST00000121854 529 ntBASIC6.89□□□□□ -1.31
CiitaP79621 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CiitaP79621 Gm26346-201ENSMUST00000157525 329 ntBASIC6.89□□□□□ -1.31
CiitaP79621 Gm24435-201ENSMUST00000157886 110 ntBASIC6.89□□□□□ -1.31
CiitaP79621 Gm16269-201ENSMUST00000160532 409 ntBASIC6.89□□□□□ -1.31
CiitaP79621 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
CiitaP79621 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CiitaP79621 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC6.89□□□□□ -1.31
CiitaP79621 Gm37901-201ENSMUST00000195107 514 ntBASIC6.89□□□□□ -1.31
CiitaP79621 Gm5717-201ENSMUST00000198243 1062 ntBASIC6.89□□□□□ -1.31
CiitaP79621 Gm45473-201ENSMUST00000211452 616 ntBASIC6.89□□□□□ -1.31
CiitaP79621 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CiitaP79621 Gm3266-201ENSMUST00000217832 591 ntBASIC6.89□□□□□ -1.31
CiitaP79621 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC6.89□□□□□ -1.31
CiitaP79621 AC211878.5-201ENSMUST00000221697 409 ntBASIC6.89□□□□□ -1.31
CiitaP79621 AC154634.2-201ENSMUST00000225983 1184 ntBASIC6.89□□□□□ -1.31
CiitaP79621 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CiitaP79621 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CiitaP79621 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CiitaP79621 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
CiitaP79621 Gm15950-201ENSMUST00000162902 1973 ntBASIC6.89□□□□□ -1.31
CiitaP79621 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
CiitaP79621 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC6.89□□□□□ -1.31
CiitaP79621 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC6.89□□□□□ -1.31
CiitaP79621 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CiitaP79621 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
CiitaP79621 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC6.88□□□□□ -1.31
CiitaP79621 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
CiitaP79621 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CiitaP79621 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CiitaP79621 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
CiitaP79621 Gm42507-201ENSMUST00000201187 2555 ntBASIC6.88□□□□□ -1.31
CiitaP79621 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
CiitaP79621 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
CiitaP79621 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CiitaP79621 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
CiitaP79621 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
CiitaP79621 AC107232.1-201ENSMUST00000227785 1503 ntBASIC6.88□□□□□ -1.31
CiitaP79621 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
CiitaP79621 AC123629.1-201ENSMUST00000225669 1364 ntBASIC6.88□□□□□ -1.31
CiitaP79621 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
CiitaP79621 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
CiitaP79621 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
CiitaP79621 Gm14356-201ENSMUST00000118322 869 ntBASIC6.88□□□□□ -1.31
CiitaP79621 Gm14580-201ENSMUST00000119122 718 ntBASIC6.88□□□□□ -1.31
CiitaP79621 Gm15696-201ENSMUST00000121730 445 ntBASIC6.88□□□□□ -1.31
CiitaP79621 Gm12833-201ENSMUST00000136112 477 ntBASIC6.88□□□□□ -1.31
CiitaP79621 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 159.4 ms