Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NcanP55066 AC161884.2-201ENSMUST00000224513 227 ntBASIC6.82□□□□□ -1.32
NcanP55066 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
NcanP55066 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
NcanP55066 Gm26130-201ENSMUST00000083171 138 ntBASIC6.82□□□□□ -1.32
NcanP55066 Gm37518-201ENSMUST00000194930 2603 ntBASIC6.82□□□□□ -1.32
NcanP55066 Gm45537-201ENSMUST00000211539 2708 ntBASIC6.82□□□□□ -1.32
NcanP55066 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
NcanP55066 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
NcanP55066 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
NcanP55066 Gm7337-202ENSMUST00000181439 2655 ntBASIC6.82□□□□□ -1.32
NcanP55066 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
NcanP55066 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NcanP55066 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
NcanP55066 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
NcanP55066 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NcanP55066 Gm38009-201ENSMUST00000194884 3341 ntBASIC6.81□□□□□ -1.32
NcanP55066 Fer1l6-203ENSMUST00000161028 5714 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
NcanP55066 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
NcanP55066 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NcanP55066 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
NcanP55066 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
NcanP55066 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NcanP55066 Gm12482-201ENSMUST00000120435 630 ntBASIC6.81□□□□□ -1.32
NcanP55066 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC6.81□□□□□ -1.32
NcanP55066 Gm17142-201ENSMUST00000164933 645 ntBASIC6.81□□□□□ -1.32
NcanP55066 Gm7626-201ENSMUST00000195801 353 ntBASIC6.81□□□□□ -1.32
NcanP55066 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC6.81□□□□□ -1.32
NcanP55066 AL603745.1-201ENSMUST00000215473 532 ntBASIC6.81□□□□□ -1.32
NcanP55066 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
NcanP55066 CT956049.1-201ENSMUST00000225671 763 ntBASIC6.81□□□□□ -1.32
NcanP55066 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NcanP55066 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NcanP55066 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC6.81□□□□□ -1.32
NcanP55066 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
NcanP55066 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NcanP55066 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
NcanP55066 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC6.81□□□□□ -1.32
NcanP55066 Olfr449-204ENSMUST00000214687 1921 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
NcanP55066 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC6.81□□□□□ -1.32
NcanP55066 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NcanP55066 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NcanP55066 Gm44417-201ENSMUST00000203298 3359 ntBASIC6.81□□□□□ -1.32
NcanP55066 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NcanP55066 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NcanP55066 Gm43766-201ENSMUST00000200590 5417 ntBASIC6.81□□□□□ -1.32
NcanP55066 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NcanP55066 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
NcanP55066 Gm43537-201ENSMUST00000199064 3110 ntBASIC6.81□□□□□ -1.32
NcanP55066 Gm38178-201ENSMUST00000194502 2471 ntBASIC6.81□□□□□ -1.32
NcanP55066 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NcanP55066 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
NcanP55066 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
NcanP55066 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NcanP55066 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NcanP55066 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
NcanP55066 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
NcanP55066 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
NcanP55066 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NcanP55066 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
NcanP55066 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
NcanP55066 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NcanP55066 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
NcanP55066 Gm14745-201ENSMUST00000118480 1096 ntBASIC6.8□□□□□ -1.32
NcanP55066 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
NcanP55066 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
NcanP55066 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NcanP55066 Gm8878-201ENSMUST00000173552 1725 ntBASIC6.8□□□□□ -1.32
NcanP55066 Mir3104-201ENSMUST00000174911 63 ntBASIC6.8□□□□□ -1.32
NcanP55066 Gm21850-201ENSMUST00000179792 359 ntBASIC6.8□□□□□ -1.32
NcanP55066 Mir6367-201ENSMUST00000183385 102 ntBASIC6.8□□□□□ -1.32
NcanP55066 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
NcanP55066 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC6.8□□□□□ -1.32
NcanP55066 Gm37685-201ENSMUST00000193507 2177 ntBASIC6.8□□□□□ -1.32
NcanP55066 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
NcanP55066 Gm9231-201ENSMUST00000220817 1009 ntBASIC6.8□□□□□ -1.32
NcanP55066 AC105950.1-201ENSMUST00000222637 408 ntBASIC6.8□□□□□ -1.32
NcanP55066 AC125117.2-201ENSMUST00000228344 1140 ntBASIC6.8□□□□□ -1.32
NcanP55066 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NcanP55066 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC6.8□□□□□ -1.32
NcanP55066 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC6.8□□□□□ -1.32
NcanP55066 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC6.8□□□□□ -1.32
NcanP55066 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
NcanP55066 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
NcanP55066 AC153729.1-201ENSMUST00000214055 2562 ntBASIC6.8□□□□□ -1.32
NcanP55066 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NcanP55066 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
NcanP55066 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
NcanP55066 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
NcanP55066 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
NcanP55066 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NcanP55066 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
NcanP55066 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
NcanP55066 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC6.8□□□□□ -1.32
NcanP55066 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
NcanP55066 Mov10l1-201ENSMUST00000015509 4052 ntAPPRIS P2 TSL 5 BASIC6.8□□□□□ -1.32
NcanP55066 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NcanP55066 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC6.79□□□□□ -1.32
NcanP55066 Gm29670-201ENSMUST00000190228 2491 ntBASIC6.79□□□□□ -1.32
NcanP55066 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms